BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040203
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26569.3| unnamed protein product [Vitis vinifera]               80   1e-13
emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]    80   1e-13
ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_002519998.1| pentatricopeptide repeat-containing protein,...    80   2e-13

>emb|CBI26569.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
 Frame = +1

Query: 37  PKHTSILISH-KLHHPILMQKNTISSXXXXXXKHVFQELSHDMYNSLIRSQCHKGDIDES 213
           P   +++ +H K  H + +++ +IS           +ELS  +YN+ IR  C  GD+D++
Sbjct: 34  PPFPTLINTHMKNKHQVSVEEVSISENG--------EELSGVVYNARIRESCRVGDVDKA 85

Query: 214 MSLLSRMDALGFRLTSLSYICLIECLGSVGRTLEADAIFQEMKFSG 351
           M LL++M+ALGF L+  SY  +IE LGSVGRTLEA+AIF+EM   G
Sbjct: 86  MKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLG 131


>emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
          Length = 466

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
 Frame = +1

Query: 37  PKHTSILISH-KLHHPILMQKNTISSXXXXXXKHVFQELSHDMYNSLIRSQCHKGDIDES 213
           P   +++ +H K  H + +++ +IS           +ELS  +YN+ IR  C  GD+D++
Sbjct: 10  PPFPTLINTHMKNKHQVSVEEVSISENG--------EELSGVVYNARIRESCRVGDVDKA 61

Query: 214 MSLLSRMDALGFRLTSLSYICLIECLGSVGRTLEADAIFQEMKFSG 351
           M LL++M+ALGF L+  SY  +IE LGSVGRTLEA+AIF+EM   G
Sbjct: 62  MKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLG 107


>ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/70 (57%), Positives = 53/70 (75%)
 Frame = +1

Query: 142 QELSHDMYNSLIRSQCHKGDIDESMSLLSRMDALGFRLTSLSYICLIECLGSVGRTLEAD 321
           +ELS  +YN+ IR  C  GD+D++M LL++M+ALGF L+  SY  +IE LGSVGRTLEA+
Sbjct: 19  EELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAE 78

Query: 322 AIFQEMKFSG 351
           AIF+EM   G
Sbjct: 79  AIFREMVHLG 88


>ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 881

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/71 (54%), Positives = 53/71 (74%)
 Frame = +1

Query: 142 QELSHDMYNSLIRSQCHKGDIDESMSLLSRMDALGFRLTSLSYICLIECLGSVGRTLEAD 321
           +ELS ++ + LI   C +GD+D +MSLLS+M+A GF L+S SY CLIE LG+VGRT EAD
Sbjct: 80  EELSSNLCSQLICECCKEGDLDRAMSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEAD 139

Query: 322 AIFQEMKFSGF 354
            +F+EM   G+
Sbjct: 140 MLFKEMVCYGY 150


>ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540762|gb|EEF42322.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/70 (58%), Positives = 52/70 (74%)
 Frame = +1

Query: 142 QELSHDMYNSLIRSQCHKGDIDESMSLLSRMDALGFRLTSLSYICLIECLGSVGRTLEAD 321
           QELS + YNS I   C  GD+D++M+LL+ M +LGF  +SLSY CLIE L SVGRTLEA+
Sbjct: 17  QELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAE 76

Query: 322 AIFQEMKFSG 351
           A++QEM   G
Sbjct: 77  ALYQEMMCFG 86