BLASTX nr result
ID: Coptis21_contig00040196
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00040196 (233 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277857.1| PREDICTED: probable protein phosphatase 2C 5... 45 1e-07 ref|XP_003527445.1| PREDICTED: probable protein phosphatase 2C 5... 47 1e-07 ref|XP_003539901.1| PREDICTED: probable protein phosphatase 2C 5... 45 1e-07 emb|CBI28905.3| unnamed protein product [Vitis vinifera] 45 1e-07 ref|XP_002329410.1| predicted protein [Populus trichocarpa] gi|2... 45 2e-07 >ref|XP_002277857.1| PREDICTED: probable protein phosphatase 2C 52 [Vitis vinifera] gi|147802577|emb|CAN68594.1| hypothetical protein VITISV_011855 [Vitis vinifera] Length = 473 Score = 45.4 bits (106), Expect(2) = 1e-07 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +1 Query: 154 EAVRIKTCRGRLFALQNEP*VPRVWL 231 EA RIK C+GR+FALQ+EP VPRVWL Sbjct: 244 EAERIKRCKGRVFALQDEPEVPRVWL 269 Score = 35.0 bits (79), Expect(2) = 1e-07 Identities = 16/23 (69%), Positives = 21/23 (91%) Frame = +2 Query: 2 GSKDNSNAIVAV*LTVVLKPDLP 70 GSKD+S+++VA+ LTV LKPDLP Sbjct: 220 GSKDSSDSMVAIQLTVDLKPDLP 242 >ref|XP_003527445.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] Length = 471 Score = 46.6 bits (109), Expect(2) = 1e-07 Identities = 21/26 (80%), Positives = 23/26 (88%) Frame = +1 Query: 154 EAVRIKTCRGRLFALQNEP*VPRVWL 231 EA RIK CRGR+FALQ+EP VPRVWL Sbjct: 243 EAERIKKCRGRVFALQDEPEVPRVWL 268 Score = 33.9 bits (76), Expect(2) = 1e-07 Identities = 15/23 (65%), Positives = 21/23 (91%) Frame = +2 Query: 2 GSKDNSNAIVAV*LTVVLKPDLP 70 GSKD+++++VA+ LTV LKPDLP Sbjct: 219 GSKDSNDSMVAIQLTVDLKPDLP 241 >ref|XP_003539901.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] Length = 471 Score = 45.4 bits (106), Expect(2) = 1e-07 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +1 Query: 154 EAVRIKTCRGRLFALQNEP*VPRVWL 231 EA RIK C+GR+FALQ+EP VPRVWL Sbjct: 243 EAERIKKCKGRVFALQDEPEVPRVWL 268 Score = 35.0 bits (79), Expect(2) = 1e-07 Identities = 16/23 (69%), Positives = 21/23 (91%) Frame = +2 Query: 2 GSKDNSNAIVAV*LTVVLKPDLP 70 GSKD++++IVA+ LTV LKPDLP Sbjct: 219 GSKDSNDSIVAIQLTVDLKPDLP 241 >emb|CBI28905.3| unnamed protein product [Vitis vinifera] Length = 447 Score = 45.4 bits (106), Expect(2) = 1e-07 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +1 Query: 154 EAVRIKTCRGRLFALQNEP*VPRVWL 231 EA RIK C+GR+FALQ+EP VPRVWL Sbjct: 244 EAERIKRCKGRVFALQDEPEVPRVWL 269 Score = 35.0 bits (79), Expect(2) = 1e-07 Identities = 16/23 (69%), Positives = 21/23 (91%) Frame = +2 Query: 2 GSKDNSNAIVAV*LTVVLKPDLP 70 GSKD+S+++VA+ LTV LKPDLP Sbjct: 220 GSKDSSDSMVAIQLTVDLKPDLP 242 >ref|XP_002329410.1| predicted protein [Populus trichocarpa] gi|222870460|gb|EEF07591.1| predicted protein [Populus trichocarpa] Length = 474 Score = 45.4 bits (106), Expect(2) = 2e-07 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +1 Query: 154 EAVRIKTCRGRLFALQNEP*VPRVWL 231 EA RIK C+GR+FALQ+EP VPRVWL Sbjct: 243 EAERIKRCKGRVFALQDEPEVPRVWL 268 Score = 34.3 bits (77), Expect(2) = 2e-07 Identities = 16/23 (69%), Positives = 21/23 (91%) Frame = +2 Query: 2 GSKDNSNAIVAV*LTVVLKPDLP 70 GSKD+++++VAV LTV LKPDLP Sbjct: 219 GSKDSNDSMVAVQLTVDLKPDLP 241