BLASTX nr result

ID: Coptis21_contig00040196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040196
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277857.1| PREDICTED: probable protein phosphatase 2C 5...    45   1e-07
ref|XP_003527445.1| PREDICTED: probable protein phosphatase 2C 5...    47   1e-07
ref|XP_003539901.1| PREDICTED: probable protein phosphatase 2C 5...    45   1e-07
emb|CBI28905.3| unnamed protein product [Vitis vinifera]               45   1e-07
ref|XP_002329410.1| predicted protein [Populus trichocarpa] gi|2...    45   2e-07

>ref|XP_002277857.1| PREDICTED: probable protein phosphatase 2C 52 [Vitis vinifera]
           gi|147802577|emb|CAN68594.1| hypothetical protein
           VITISV_011855 [Vitis vinifera]
          Length = 473

 Score = 45.4 bits (106), Expect(2) = 1e-07
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +1

Query: 154 EAVRIKTCRGRLFALQNEP*VPRVWL 231
           EA RIK C+GR+FALQ+EP VPRVWL
Sbjct: 244 EAERIKRCKGRVFALQDEPEVPRVWL 269



 Score = 35.0 bits (79), Expect(2) = 1e-07
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = +2

Query: 2   GSKDNSNAIVAV*LTVVLKPDLP 70
           GSKD+S+++VA+ LTV LKPDLP
Sbjct: 220 GSKDSSDSMVAIQLTVDLKPDLP 242


>ref|XP_003527445.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max]
          Length = 471

 Score = 46.6 bits (109), Expect(2) = 1e-07
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = +1

Query: 154 EAVRIKTCRGRLFALQNEP*VPRVWL 231
           EA RIK CRGR+FALQ+EP VPRVWL
Sbjct: 243 EAERIKKCRGRVFALQDEPEVPRVWL 268



 Score = 33.9 bits (76), Expect(2) = 1e-07
 Identities = 15/23 (65%), Positives = 21/23 (91%)
 Frame = +2

Query: 2   GSKDNSNAIVAV*LTVVLKPDLP 70
           GSKD+++++VA+ LTV LKPDLP
Sbjct: 219 GSKDSNDSMVAIQLTVDLKPDLP 241


>ref|XP_003539901.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max]
          Length = 471

 Score = 45.4 bits (106), Expect(2) = 1e-07
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +1

Query: 154 EAVRIKTCRGRLFALQNEP*VPRVWL 231
           EA RIK C+GR+FALQ+EP VPRVWL
Sbjct: 243 EAERIKKCKGRVFALQDEPEVPRVWL 268



 Score = 35.0 bits (79), Expect(2) = 1e-07
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = +2

Query: 2   GSKDNSNAIVAV*LTVVLKPDLP 70
           GSKD++++IVA+ LTV LKPDLP
Sbjct: 219 GSKDSNDSIVAIQLTVDLKPDLP 241


>emb|CBI28905.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score = 45.4 bits (106), Expect(2) = 1e-07
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +1

Query: 154 EAVRIKTCRGRLFALQNEP*VPRVWL 231
           EA RIK C+GR+FALQ+EP VPRVWL
Sbjct: 244 EAERIKRCKGRVFALQDEPEVPRVWL 269



 Score = 35.0 bits (79), Expect(2) = 1e-07
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = +2

Query: 2   GSKDNSNAIVAV*LTVVLKPDLP 70
           GSKD+S+++VA+ LTV LKPDLP
Sbjct: 220 GSKDSSDSMVAIQLTVDLKPDLP 242


>ref|XP_002329410.1| predicted protein [Populus trichocarpa] gi|222870460|gb|EEF07591.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 45.4 bits (106), Expect(2) = 2e-07
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +1

Query: 154 EAVRIKTCRGRLFALQNEP*VPRVWL 231
           EA RIK C+GR+FALQ+EP VPRVWL
Sbjct: 243 EAERIKRCKGRVFALQDEPEVPRVWL 268



 Score = 34.3 bits (77), Expect(2) = 2e-07
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = +2

Query: 2   GSKDNSNAIVAV*LTVVLKPDLP 70
           GSKD+++++VAV LTV LKPDLP
Sbjct: 219 GSKDSNDSMVAVQLTVDLKPDLP 241


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