BLASTX nr result

ID: Coptis21_contig00040159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040159
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308512.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815...   110   1e-22
ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262...   108   5e-22
emb|CBI20741.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262...   108   5e-22

>ref|XP_002308512.1| predicted protein [Populus trichocarpa] gi|222854488|gb|EEE92035.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  111 bits (278), Expect = 5e-23
 Identities = 66/119 (55%), Positives = 78/119 (65%), Gaps = 6/119 (5%)
 Frame = -3

Query: 343 NFQARQETNGTDGSQYVMSVMEHPMYSKSRASLEERQQIVDLAKVGVRNRRPHHMQ---- 176
           NFQ        DG     +V + P   + +AS EER QIV++AK GVRNRR H MQ    
Sbjct: 143 NFQNHITEEEMDGR----NVPQDPQSLRGKASHEERLQIVNIAKNGVRNRRSHRMQTCQT 198

Query: 175 -IRPITPSILMDSICWSISDPTSAACVYTDISGFEDRSE-NTSVFFDARGDGRGPEASF 5
            IRPITPS L+DSICWSIS+PTS A +YTD    ED SE +TSVFFDA+GD +  EASF
Sbjct: 199 PIRPITPSSLLDSICWSISEPTSTASIYTDSFSSEDVSEQHTSVFFDAKGDIKDSEASF 257


>ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815253 [Glycine max]
          Length = 541

 Score =  110 bits (275), Expect = 1e-22
 Identities = 62/112 (55%), Positives = 76/112 (67%), Gaps = 7/112 (6%)
 Frame = -3

Query: 319 NGTDGSQYV-MSVMEHPMYSKSRASLEERQQIVDLAKVGVRNRRPHHMQ-----IRPITP 158
           N   G + +   V+ +   ++S  S EERQQIV+ AK GVRNRR   MQ     IRPITP
Sbjct: 297 NDISGKEVIKQKVLNNLPDTESEVSYEERQQIVNSAKNGVRNRRGRRMQTCQTPIRPITP 356

Query: 157 SILMDSICWSISDPTSAACVYTDISGFEDRSEN-TSVFFDARGDGRGPEASF 5
           + L+DSICWSIS+PTS A +YTD    ED SEN TS+FFDA+GDG+  EASF
Sbjct: 357 NNLLDSICWSISEPTSTASIYTDSFSVEDPSENHTSIFFDAKGDGKDSEASF 408


>ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262753 isoform 1 [Vitis
           vinifera]
          Length = 551

 Score =  108 bits (270), Expect = 5e-22
 Identities = 58/92 (63%), Positives = 69/92 (75%), Gaps = 6/92 (6%)
 Frame = -3

Query: 262 KSRASLEERQQIVDLAKVGVRNRRPHHMQ-----IRPITPSILMDSICWSISDPTSAACV 98
           + +AS EERQ+IV LAK GVRNRR  +MQ     IRPI PS L+DSICWSIS+PTS A +
Sbjct: 327 RKKASHEERQEIVSLAKAGVRNRRARYMQTCQTPIRPINPSSLLDSICWSISEPTSTASI 386

Query: 97  YTDISGFEDRSEN-TSVFFDARGDGRGPEASF 5
           YT+ S   D SE+ TSVFFDA+GDG+  EASF
Sbjct: 387 YTESSSVGDVSEHQTSVFFDAKGDGKESEASF 418


>emb|CBI20741.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score =  108 bits (270), Expect = 5e-22
 Identities = 58/92 (63%), Positives = 69/92 (75%), Gaps = 6/92 (6%)
 Frame = -3

Query: 262 KSRASLEERQQIVDLAKVGVRNRRPHHMQ-----IRPITPSILMDSICWSISDPTSAACV 98
           + +AS EERQ+IV LAK GVRNRR  +MQ     IRPI PS L+DSICWSIS+PTS A +
Sbjct: 239 RKKASHEERQEIVSLAKAGVRNRRARYMQTCQTPIRPINPSSLLDSICWSISEPTSTASI 298

Query: 97  YTDISGFEDRSEN-TSVFFDARGDGRGPEASF 5
           YT+ S   D SE+ TSVFFDA+GDG+  EASF
Sbjct: 299 YTESSSVGDVSEHQTSVFFDAKGDGKESEASF 330


>ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262753 isoform 2 [Vitis
           vinifera]
          Length = 546

 Score =  108 bits (270), Expect = 5e-22
 Identities = 58/92 (63%), Positives = 69/92 (75%), Gaps = 6/92 (6%)
 Frame = -3

Query: 262 KSRASLEERQQIVDLAKVGVRNRRPHHMQ-----IRPITPSILMDSICWSISDPTSAACV 98
           + +AS EERQ+IV LAK GVRNRR  +MQ     IRPI PS L+DSICWSIS+PTS A +
Sbjct: 322 RKKASHEERQEIVSLAKAGVRNRRARYMQTCQTPIRPINPSSLLDSICWSISEPTSTASI 381

Query: 97  YTDISGFEDRSEN-TSVFFDARGDGRGPEASF 5
           YT+ S   D SE+ TSVFFDA+GDG+  EASF
Sbjct: 382 YTESSSVGDVSEHQTSVFFDAKGDGKESEASF 413


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