BLASTX nr result

ID: Coptis21_contig00040147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040147
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17199.1| unknown [Picea sitchensis]                              58   9e-07
gb|ABR16875.1| unknown [Picea sitchensis]                              58   9e-07
gb|AFW69336.1| putative ubiquitin-conjugating enzyme family [Zea...    57   1e-06
gb|ACF06494.1| RUB1 conjugating enzyme [Elaeis guineensis]             57   1e-06
ref|NP_001105261.1| uncharacterized protein LOC542170 [Zea mays]...    57   1e-06

>gb|ABR17199.1| unknown [Picea sitchensis]
          Length = 183

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -1

Query: 84  DISELNLPKTTTIAFPNGKDDLMNFEVT 1
           DISELNLPKTT+I+FPNGKDDLMNFEVT
Sbjct: 37  DISELNLPKTTSISFPNGKDDLMNFEVT 64


>gb|ABR16875.1| unknown [Picea sitchensis]
          Length = 183

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -1

Query: 84  DISELNLPKTTTIAFPNGKDDLMNFEVT 1
           DISELNLPKTT+I+FPNGKDDLMNFEVT
Sbjct: 37  DISELNLPKTTSISFPNGKDDLMNFEVT 64


>gb|AFW69336.1| putative ubiquitin-conjugating enzyme family [Zea mays]
          Length = 175

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -1

Query: 84  DISELNLPKTTTIAFPNGKDDLMNFEVT 1
           DISELNLPKTT+I+FPNGKDDLMNFE+T
Sbjct: 37  DISELNLPKTTSISFPNGKDDLMNFEIT 64


>gb|ACF06494.1| RUB1 conjugating enzyme [Elaeis guineensis]
          Length = 183

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -1

Query: 84  DISELNLPKTTTIAFPNGKDDLMNFEVT 1
           DISELNLPKTTTI+FPNGKDDLMNFE++
Sbjct: 37  DISELNLPKTTTISFPNGKDDLMNFEIS 64


>ref|NP_001105261.1| uncharacterized protein LOC542170 [Zea mays]
           gi|46810481|gb|AAT01622.1| putative RUB1 conjugating
           enzyme [Zea mays] gi|194700226|gb|ACF84197.1| unknown
           [Zea mays] gi|224034827|gb|ACN36489.1| unknown [Zea
           mays] gi|413934783|gb|AFW69334.1| putative
           ubiquitin-conjugating enzyme family isoform 1 [Zea mays]
           gi|413934784|gb|AFW69335.1| putative
           ubiquitin-conjugating enzyme family isoform 2 [Zea mays]
          Length = 184

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -1

Query: 84  DISELNLPKTTTIAFPNGKDDLMNFEVT 1
           DISELNLPKTT+I+FPNGKDDLMNFE+T
Sbjct: 37  DISELNLPKTTSISFPNGKDDLMNFEIT 64


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