BLASTX nr result
ID: Coptis21_contig00040144
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00040144 (261 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum] 85 5e-15 ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 83 3e-14 ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 82 4e-14 gb|AEZ06403.1| VIN3A-like protein, partial [Aquilegia coerulea] 82 5e-14 ref|XP_004146321.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 82 6e-14 >gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum] Length = 739 Score = 85.1 bits (209), Expect = 5e-15 Identities = 40/62 (64%), Positives = 51/62 (82%) Frame = -2 Query: 260 EKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIKKTCLTKMKIIERLMRVVSK 81 EKR+L+YE+SK PEML+SWSRQE+ Q+LCAE GKE K T LTK+KIIE L+++VS+ Sbjct: 23 EKRELVYELSKQSHGAPEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSE 82 Query: 80 KK 75 KK Sbjct: 83 KK 84 >ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max] Length = 737 Score = 82.8 bits (203), Expect = 3e-14 Identities = 39/62 (62%), Positives = 50/62 (80%) Frame = -2 Query: 260 EKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIKKTCLTKMKIIERLMRVVSK 81 EKR+L+YE+SK EML+SWSRQE+ Q+LCAE GKE K T LTK+KIIE L+++VS+ Sbjct: 24 EKRELVYEVSKWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSE 83 Query: 80 KK 75 KK Sbjct: 84 KK 85 >ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera] Length = 738 Score = 82.4 bits (202), Expect = 4e-14 Identities = 40/61 (65%), Positives = 49/61 (80%) Frame = -2 Query: 260 EKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIKKTCLTKMKIIERLMRVVSK 81 EKR+L+Y +SK PEML+SWSRQE+ Q+LCAE GKE K T LTK+KIIE L+RVVS+ Sbjct: 22 EKRELVYAVSKWSRGGPEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIEHLLRVVSE 81 Query: 80 K 78 K Sbjct: 82 K 82 >gb|AEZ06403.1| VIN3A-like protein, partial [Aquilegia coerulea] Length = 710 Score = 82.0 bits (201), Expect = 5e-14 Identities = 42/61 (68%), Positives = 47/61 (77%) Frame = -2 Query: 260 EKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIKKTCLTKMKIIERLMRVVSK 81 EKR+L+YEISKC D EML+SWSR+EL Q+LCAE G E K L KMKIIERLMR SK Sbjct: 3 EKRELVYEISKCTDDGHEMLQSWSRRELSQILCAEMGIERKYASLPKMKIIERLMRFFSK 62 Query: 80 K 78 K Sbjct: 63 K 63 >ref|XP_004146321.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus] gi|449502927|ref|XP_004161782.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus] Length = 737 Score = 81.6 bits (200), Expect = 6e-14 Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 2/84 (2%) Frame = -2 Query: 260 EKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIKKTCLTKMKIIERLMRVVSK 81 +KR L+YEIS P A PE+L+SWSRQE+ ++LCAE GKE K T LTK+KIIE L+++V K Sbjct: 23 KKRNLVYEISDQPHA-PELLQSWSRQEILEILCAEMGKERKYTGLTKLKIIENLLKIVGK 81 Query: 80 KK--RTRKISDGPLLESKSLPIDS 15 KK T ++D L+++S P S Sbjct: 82 KKSGSTEDVTD---LDNQSSPCPS 102