BLASTX nr result

ID: Coptis21_contig00040144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040144
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]      85   5e-15
ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    83   3e-14
ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    82   4e-14
gb|AEZ06403.1| VIN3A-like protein, partial [Aquilegia coerulea]        82   5e-14
ref|XP_004146321.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    82   6e-14

>gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]
          Length = 739

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/62 (64%), Positives = 51/62 (82%)
 Frame = -2

Query: 260 EKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIKKTCLTKMKIIERLMRVVSK 81
           EKR+L+YE+SK     PEML+SWSRQE+ Q+LCAE GKE K T LTK+KIIE L+++VS+
Sbjct: 23  EKRELVYELSKQSHGAPEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSE 82

Query: 80  KK 75
           KK
Sbjct: 83  KK 84


>ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 737

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/62 (62%), Positives = 50/62 (80%)
 Frame = -2

Query: 260 EKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIKKTCLTKMKIIERLMRVVSK 81
           EKR+L+YE+SK      EML+SWSRQE+ Q+LCAE GKE K T LTK+KIIE L+++VS+
Sbjct: 24  EKRELVYEVSKWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSE 83

Query: 80  KK 75
           KK
Sbjct: 84  KK 85


>ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 738

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 40/61 (65%), Positives = 49/61 (80%)
 Frame = -2

Query: 260 EKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIKKTCLTKMKIIERLMRVVSK 81
           EKR+L+Y +SK     PEML+SWSRQE+ Q+LCAE GKE K T LTK+KIIE L+RVVS+
Sbjct: 22  EKRELVYAVSKWSRGGPEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIEHLLRVVSE 81

Query: 80  K 78
           K
Sbjct: 82  K 82


>gb|AEZ06403.1| VIN3A-like protein, partial [Aquilegia coerulea]
          Length = 710

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/61 (68%), Positives = 47/61 (77%)
 Frame = -2

Query: 260 EKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIKKTCLTKMKIIERLMRVVSK 81
           EKR+L+YEISKC D   EML+SWSR+EL Q+LCAE G E K   L KMKIIERLMR  SK
Sbjct: 3   EKRELVYEISKCTDDGHEMLQSWSRRELSQILCAEMGIERKYASLPKMKIIERLMRFFSK 62

Query: 80  K 78
           K
Sbjct: 63  K 63


>ref|XP_004146321.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis
           sativus] gi|449502927|ref|XP_004161782.1| PREDICTED:
           protein VERNALIZATION INSENSITIVE 3-like [Cucumis
           sativus]
          Length = 737

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
 Frame = -2

Query: 260 EKRQLIYEISKCPDAFPEMLRSWSRQELFQVLCAETGKEIKKTCLTKMKIIERLMRVVSK 81
           +KR L+YEIS  P A PE+L+SWSRQE+ ++LCAE GKE K T LTK+KIIE L+++V K
Sbjct: 23  KKRNLVYEISDQPHA-PELLQSWSRQEILEILCAEMGKERKYTGLTKLKIIENLLKIVGK 81

Query: 80  KK--RTRKISDGPLLESKSLPIDS 15
           KK   T  ++D   L+++S P  S
Sbjct: 82  KKSGSTEDVTD---LDNQSSPCPS 102


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