BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040126
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332376.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-07
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]    57   3e-07
emb|CBI15973.3| unnamed protein product [Vitis vinifera]               57   4e-07
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07

>ref|XP_002332376.1| predicted protein [Populus trichocarpa] gi|222832200|gb|EEE70677.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/62 (41%), Positives = 39/62 (62%)
 Frame = -3

Query: 197 LHAHTITSGLFHDPFTSSRLVEFCFNSKHANLTYGQLIFKSIRNPDLYTWNAVMLGYIKL 18
           +HA  + +GLF DPFT+S++V FC   +  +L Y +L+F  I NP  YT N+++ G    
Sbjct: 7   IHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDK 66

Query: 17  NL 12
           NL
Sbjct: 67  NL 68


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 56.6 bits (135), Expect(2) = 3e-07
 Identities = 25/63 (39%), Positives = 38/63 (60%)
 Frame = -3

Query: 197 LHAHTITSGLFHDPFTSSRLVEFCFNSKHANLTYGQLIFKSIRNPDLYTWNAVMLGYIKL 18
           +HA  + +GLF DPF++SRL+     S   +L Y Q +F  I +P+LYTWN ++  Y   
Sbjct: 54  IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASS 113

Query: 17  NLP 9
           + P
Sbjct: 114 SNP 116



 Score = 22.3 bits (46), Expect(2) = 3e-07
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -2

Query: 300 PRPQITTFSTKTQNPNHPILPLI-QNIQTQQL 208
           P P   T +      NHP L LI Q  +T+QL
Sbjct: 20  PNPNSITLNNDRYFANHPTLSLIDQCSETKQL 51


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score = 56.6 bits (135), Expect(2) = 3e-07
 Identities = 25/63 (39%), Positives = 38/63 (60%)
 Frame = -3

Query: 197 LHAHTITSGLFHDPFTSSRLVEFCFNSKHANLTYGQLIFKSIRNPDLYTWNAVMLGYIKL 18
           +HA  + +GLF DPF++SRL+     S   +L Y Q +F  I +P+LYTWN ++  Y   
Sbjct: 54  IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASS 113

Query: 17  NLP 9
           + P
Sbjct: 114 SNP 116



 Score = 22.3 bits (46), Expect(2) = 3e-07
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -2

Query: 300 PRPQITTFSTKTQNPNHPILPLI-QNIQTQQL 208
           P P   T +      NHP L LI Q  +T+QL
Sbjct: 20  PNPNSITLNNDRYFANHPTLSLIDQCSETKQL 51


>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 56.6 bits (135), Expect(2) = 4e-07
 Identities = 25/63 (39%), Positives = 38/63 (60%)
 Frame = -3

Query: 197 LHAHTITSGLFHDPFTSSRLVEFCFNSKHANLTYGQLIFKSIRNPDLYTWNAVMLGYIKL 18
           +HA  + +GLF DPF++SRL+     S   +L Y Q +F  I +P+LYTWN ++  Y   
Sbjct: 54  IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASS 113

Query: 17  NLP 9
           + P
Sbjct: 114 SNP 116



 Score = 22.3 bits (46), Expect(2) = 4e-07
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -2

Query: 300 PRPQITTFSTKTQNPNHPILPLI-QNIQTQQL 208
           P P   T +      NHP L LI Q  +T+QL
Sbjct: 20  PNPNSITLNNDRYFANHPTLSLIDQCSETKQL 51


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
 Frame = -3

Query: 281 HFQPKPKT-----QTTPFFHLYKTSKPNN*ISILHAHTITSGLFHDPFTSSRLVEFCFNS 117
           HFQP         Q  P   L  T K    +  +H+  I +GL +  F  S+L+EFC  S
Sbjct: 18  HFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAIS 77

Query: 116 KHANLTYGQLIFKSIRNPDLYTWNAVMLGYIKLNLPI 6
              NL+Y  L+F+SI  P+ + WN ++ G    + P+
Sbjct: 78  PFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPV 114