BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040090
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra...   142   4e-32
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...   142   4e-32
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   141   5e-32
ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793...   138   5e-31
ref|XP_003543060.1| PREDICTED: uncharacterized protein LOC100812...   137   9e-31

>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1143

 Score =  142 bits (357), Expect = 4e-32
 Identities = 63/89 (70%), Positives = 72/89 (80%)
 Frame = +2

Query: 2   VHIFSGASFAPVGNYHGNVASAIAAPTFSSSGCCLASVWHDTSKDCTSLKITRILPPALP 181
           VHIFSG +FAPV NY  NV  AIAAP FSS+ CC ASVWHD +KDCT L+I R+LPPA P
Sbjct: 466 VHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVWHDVNKDCTMLRIIRVLPPAAP 525

Query: 182 NSAFKDNSATWERAIGDRFWWSLLVGVDW 268
           ++  K NS+TWERAI +RFWWSLLVGVDW
Sbjct: 526 SNQLKANSSTWERAIAERFWWSLLVGVDW 554


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1220

 Score =  142 bits (357), Expect = 4e-32
 Identities = 63/89 (70%), Positives = 72/89 (80%)
 Frame = +2

Query: 2   VHIFSGASFAPVGNYHGNVASAIAAPTFSSSGCCLASVWHDTSKDCTSLKITRILPPALP 181
           VHIFSG +FAPV NY  NV  AIAAP FSS+ CC ASVWHD +KDCT L+I R+LPPA P
Sbjct: 543 VHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVWHDVNKDCTMLRIIRVLPPAAP 602

Query: 182 NSAFKDNSATWERAIGDRFWWSLLVGVDW 268
           ++  K NS+TWERAI +RFWWSLLVGVDW
Sbjct: 603 SNQLKANSSTWERAIAERFWWSLLVGVDW 631


>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
           gi|223541698|gb|EEF43246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1255

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/89 (73%), Positives = 73/89 (82%)
 Frame = +2

Query: 2   VHIFSGASFAPVGNYHGNVASAIAAPTFSSSGCCLASVWHDTSKDCTSLKITRILPPALP 181
           VHIFSG +F PV +Y  NV SAIAAP FSS+ CC ASVWHDTSKD T LKI R+LPPA+P
Sbjct: 581 VHIFSGPNFTPVDSYQINVGSAIAAPAFSSTSCCSASVWHDTSKDRTILKIIRVLPPAVP 640

Query: 182 NSAFKDNSATWERAIGDRFWWSLLVGVDW 268
           +S  K NS+TWERAI +RFWWSLLVGVDW
Sbjct: 641 SSQVKANSSTWERAIAERFWWSLLVGVDW 669


>ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793949 [Glycine max]
          Length = 1244

 Score =  138 bits (347), Expect = 5e-31
 Identities = 61/89 (68%), Positives = 72/89 (80%)
 Frame = +2

Query: 2   VHIFSGASFAPVGNYHGNVASAIAAPTFSSSGCCLASVWHDTSKDCTSLKITRILPPALP 181
           VH+FSG +F PV NY  NV SAIAAP FSS+ CC ASVWHD+SK+CT L+I R+LPP++P
Sbjct: 581 VHVFSGPNFTPVDNYQINVGSAIAAPAFSSTSCCSASVWHDSSKNCTILRIIRVLPPSIP 640

Query: 182 NSAFKDNSATWERAIGDRFWWSLLVGVDW 268
            S  K NS+TWERAI +RFWWSLLV VDW
Sbjct: 641 ISQAKANSSTWERAIAERFWWSLLVSVDW 669


>ref|XP_003543060.1| PREDICTED: uncharacterized protein LOC100812938 [Glycine max]
          Length = 1189

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/89 (70%), Positives = 71/89 (79%)
 Frame = +2

Query: 2   VHIFSGASFAPVGNYHGNVASAIAAPTFSSSGCCLASVWHDTSKDCTSLKITRILPPALP 181
           VHIFSG +FAPV NY  +V SAIAAP FSS+ CC ASVWHD SKD T LKI R+LPPA+P
Sbjct: 517 VHIFSGPNFAPVDNYQISVGSAIAAPAFSSTSCCSASVWHDPSKDQTILKIIRVLPPAIP 576

Query: 182 NSAFKDNSATWERAIGDRFWWSLLVGVDW 268
            S  K NS+ WERAI +RFWWSLLVGV+W
Sbjct: 577 TSQVKTNSSNWERAIAERFWWSLLVGVNW 605