BLASTX nr result

ID: Coptis21_contig00040089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040089
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521536.1| ATP binding protein, putative [Ricinus commu...    82   3e-14
ref|XP_002310261.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_003520292.1| PREDICTED: ATP-dependent zinc metalloproteas...    77   1e-12
gb|ADE76156.1| unknown [Picea sitchensis]                              76   3e-12
ref|XP_002313783.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>ref|XP_002521536.1| ATP binding protein, putative [Ricinus communis]
           gi|223539214|gb|EEF40807.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 528

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/88 (43%), Positives = 54/88 (61%)
 Frame = +2

Query: 26  FNFKGFVVKNLRKLFNHFSSQITMVFEEYSDLTTNNIYVAAETYLGSKSLASTKRFKVCQ 205
           + F  + + N+RK+   FSSQITMV +E+     N IY AAETYL S    ST+RFKV +
Sbjct: 40  YEFHDYFLFNIRKILGRFSSQITMVVDEFDGFVHNQIYEAAETYLASNISPSTRRFKVSK 99

Query: 206 DKNNKSYVFSMGKLEELVDVFEGIRFNW 289
            +  K+    M   EE++DV+ G++F W
Sbjct: 100 PEKEKNLTVKMEGNEEIIDVYRGVKFKW 127


>ref|XP_002310261.1| predicted protein [Populus trichocarpa] gi|222853164|gb|EEE90711.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/86 (43%), Positives = 53/86 (61%)
 Frame = +2

Query: 32  FKGFVVKNLRKLFNHFSSQITMVFEEYSDLTTNNIYVAAETYLGSKSLASTKRFKVCQDK 211
           F+ +    +R  F  FSSQ+TMV +E+   T N IY AAETYLGSK   ST+R KV + +
Sbjct: 41  FQAYFFYKIRNFFGRFSSQLTMVVDEFDGYTYNEIYGAAETYLGSKISPSTQRLKVSKPE 100

Query: 212 NNKSYVFSMGKLEELVDVFEGIRFNW 289
               +   M + EE+VD+F+ ++F W
Sbjct: 101 KENEFTVKMDRNEEIVDIFQDVKFKW 126


>ref|XP_003520292.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 1-like [Glycine
           max]
          Length = 498

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/85 (38%), Positives = 54/85 (63%)
 Frame = +2

Query: 35  KGFVVKNLRKLFNHFSSQITMVFEEYSDLTTNNIYVAAETYLGSKSLASTKRFKVCQDKN 214
           + ++   +  +F  FSS+IT+V +E+  L  N IY AAETYLG+K   +T+R KV + + 
Sbjct: 42  RSYITNGIHSMFWRFSSEITLVIDEFDGLLNNQIYEAAETYLGAKISPNTRRLKVSKPET 101

Query: 215 NKSYVFSMGKLEELVDVFEGIRFNW 289
           + ++  +M + E L DVF  ++FNW
Sbjct: 102 DTTFALTMERNESLTDVFRSMKFNW 126


>gb|ADE76156.1| unknown [Picea sitchensis]
          Length = 478

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/97 (37%), Positives = 60/97 (61%)
 Frame = +2

Query: 32  FKGFVVKNLRKLFNHFSSQITMVFEEYSDLTTNNIYVAAETYLGSKSLASTKRFKVCQDK 211
           F GF+ K+LR L    SS I++V EE   +  + +Y A +TYL  +S ++ KR K+ + +
Sbjct: 29  FYGFLSKSLRSLIGIVSSHISVVIEENDGMKVSEVYEAVQTYLSVRSCSAAKRLKLKKPQ 88

Query: 212 NNKSYVFSMGKLEELVDVFEGIRFNWRYKSKETRFQI 322
           +NK + FSM + E++ + +EGI+  W + S E + QI
Sbjct: 89  HNKEFTFSMARNEQIAEEYEGIKVWWVFHSSERKQQI 125


>ref|XP_002313783.1| predicted protein [Populus trichocarpa] gi|222850191|gb|EEE87738.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/94 (36%), Positives = 54/94 (57%)
 Frame = +2

Query: 26  FNFKGFVVKNLRKLFNHFSSQITMVFEEYSDLTTNNIYVAAETYLGSKSLASTKRFKVCQ 205
           + F+ ++   L+ L N FSS+ T+V EEY +L  NN++ AAE YL        K+ K+  
Sbjct: 37  YEFQSYIFYKLKTLINSFSSEFTLVIEEYDNLNHNNLFKAAELYLEPIIPPDAKKLKISL 96

Query: 206 DKNNKSYVFSMGKLEELVDVFEGIRFNWRYKSKE 307
            K    + FS+ + +E+VD F GI   W++ SK+
Sbjct: 97  TKKESKFSFSLDRNQEIVDTFNGITLKWKFISKQ 130


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