BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040040
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-51
emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]   206   1e-51
ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48
ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containi...   195   3e-48
ref|XP_002306972.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47

>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
           gi|297745544|emb|CBI40709.3| unnamed protein product
           [Vitis vinifera]
          Length = 695

 Score =  206 bits (525), Expect = 1e-51
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G WQKSF VLREM+NSGVSPDRHFYNVMIDTFGK NCL+HA+ATF+RM+ EG++PD VTW
Sbjct: 410 GKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTW 469

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLG 349
           NTLID HCKSG H+KAEELF AMQ+SG SPCTTTYNIMINS G+QE+WE++K LLG
Sbjct: 470 NTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLG 525



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/104 (30%), Positives = 62/104 (59%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G  + + S++ EM+ SG SPD H Y+++ID +      E A    + M+A G++P++  +
Sbjct: 340 GSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVF 399

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQ 313
           + ++ S+   G+  K+ ++   M++SG SP    YN+MI++ G+
Sbjct: 400 SRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGK 443



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/113 (32%), Positives = 60/113 (53%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G   K+  +   M+ SG SP    YN+MI++FG+    E       +M+++G+  + VT+
Sbjct: 480 GHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTY 539

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKN 340
            TL+D + +SGR   A E    M+  G  P +T YN +IN+  Q+   E+  N
Sbjct: 540 TTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAIN 592



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/115 (30%), Positives = 58/115 (50%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           GD  ++ S L  ++ +G+SP       +I   G     E A A FE +K  G+ P    +
Sbjct: 270 GDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAY 329

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLL 346
           N L+  + K+G    AE +   M+ SGFSP   TY+++I++     +WE  + +L
Sbjct: 330 NALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVL 384



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/111 (27%), Positives = 60/111 (54%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G ++ +   L  MK+ G+ P    YN +I+ + +    E AI  F  M+A+G+KP  +  
Sbjct: 550 GRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVL 609

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEI 334
           N+LI++  +  R  +A  +   M+++   P   TY  ++ +L + EK++++
Sbjct: 610 NSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKV 660



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/120 (25%), Positives = 61/120 (50%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G  +++ ++  E+K  G+ P    YN ++  + K   L+ A +    M+  G  PD  T+
Sbjct: 305 GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 364

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGAPKN 361
           + LID++  +GR + A  +   M+ SG  P +  ++ ++ S   + KW++   +L   +N
Sbjct: 365 SLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRN 424


>emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
          Length = 724

 Score =  206 bits (525), Expect = 1e-51
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G WQKSF VLREM+NSGVSPDRHFYNVMIDTFGK NCL+HA+ATF+RM+ EG++PD VTW
Sbjct: 481 GKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTW 540

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLG 349
           NTLID HCKSG H+KAEELF AMQ+SG SPCTTTYNIMINS G+QE+WE++K LLG
Sbjct: 541 NTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLG 596



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/104 (30%), Positives = 62/104 (59%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G  + + S++ EM+ SG SPD H Y+++ID +      E A    + M+A G++P++  +
Sbjct: 411 GSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVF 470

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQ 313
           + ++ S+   G+  K+ ++   M++SG SP    YN+MI++ G+
Sbjct: 471 SRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGK 514



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/115 (30%), Positives = 58/115 (50%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           GD  ++ S L  ++ +G+SP       +I   G     E A A FE +K  G+ P    +
Sbjct: 341 GDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAY 400

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLL 346
           N L+  + K+G    AE +   M+ SGFSP   TY+++I++     +WE  + +L
Sbjct: 401 NALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVL 455



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/120 (25%), Positives = 61/120 (50%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G  +++ ++  E+K  G+ P    YN ++  + K   L+ A +    M+  G  PD  T+
Sbjct: 376 GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 435

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGAPKN 361
           + LID++  +GR + A  +   M+ SG  P +  ++ ++ S   + KW++   +L   +N
Sbjct: 436 SLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRN 495


>ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 680

 Score =  196 bits (497), Expect = 2e-48
 Identities = 86/115 (74%), Positives = 100/115 (86%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G+WQKSF VL++MK+SGV PDRHFYNVMIDTFGKYNCL+HA+ATFERM +EGI PD VTW
Sbjct: 395 GEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTW 454

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLL 346
           NTLID HCKSGRHD AEELF  MQ  G+SPC TTYNIMINS+G+Q++WE++   L
Sbjct: 455 NTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFL 509



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/94 (36%), Positives = 58/94 (61%)
 Frame = +2

Query: 35  EMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLIDSHCKSG 214
           EM+  G SP    YN+MI++ G+    E   A   +M+++G++P+++T+ TL+D + KSG
Sbjct: 476 EMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSG 535

Query: 215 RHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQ 316
           R   A E    ++ +GF P +T YN +IN+  Q+
Sbjct: 536 RFSDAIECLEVLKSTGFKPTSTMYNALINAYAQR 569



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/105 (27%), Positives = 54/105 (51%)
 Frame = +2

Query: 8   WQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNT 187
           W++  + L +M++ G+ P+   Y  ++D +GK      AI   E +K+ G KP +  +N 
Sbjct: 502 WEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNA 561

Query: 188 LIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEK 322
           LI+++ + G  + A   F  M   G +P     N +IN+ G+  +
Sbjct: 562 LINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRR 606



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/96 (27%), Positives = 53/96 (55%)
 Frame = +2

Query: 26  VLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLIDSHC 205
           V+ EM+ +GV PD   Y+++ID +      E A    + M+A  ++P++  ++ ++ ++ 
Sbjct: 333 VVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYR 392

Query: 206 KSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQ 313
             G   K+ ++   M+ SG  P    YN+MI++ G+
Sbjct: 393 DKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGK 428


>ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 696

 Score =  195 bits (496), Expect = 3e-48
 Identities = 84/115 (73%), Positives = 102/115 (88%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G+WQKSF VL++MK++GV PDRHFYNVMIDTFGKYNCL+HA+ATFERM +EGI+PD VTW
Sbjct: 411 GEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTW 470

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLL 346
           NTLI+ HCKSGRH+ AEELFG MQ  G+SPC TTYNIMINS+G+Q++WE++   L
Sbjct: 471 NTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFL 525



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/94 (35%), Positives = 56/94 (59%)
 Frame = +2

Query: 35  EMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLIDSHCKSG 214
           EM+  G SP    YN+MI++ G+    E       +M+++G+ P+++T+ TL+D + KSG
Sbjct: 492 EMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSG 551

Query: 215 RHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQ 316
           R   A E    ++ +GF P +T YN +IN+  Q+
Sbjct: 552 RFSDAIECLEVLKSTGFKPTSTMYNALINAYAQR 585



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/105 (27%), Positives = 53/105 (50%)
 Frame = +2

Query: 8   WQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNT 187
           W++    L +M++ G+ P+   Y  ++D +GK      AI   E +K+ G KP +  +N 
Sbjct: 518 WEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNA 577

Query: 188 LIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEK 322
           LI+++ + G  + A   F  M   G +P     N +IN+ G+  +
Sbjct: 578 LINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRR 622



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/96 (27%), Positives = 53/96 (55%)
 Frame = +2

Query: 26  VLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLIDSHC 205
           V+ EM+ +GV PD   Y+++ID +      E A    + M+A  ++P++  ++ ++ S+ 
Sbjct: 349 VVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYR 408

Query: 206 KSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQ 313
             G   K+ ++   M+ +G  P    YN+MI++ G+
Sbjct: 409 DKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGK 444



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/110 (24%), Positives = 56/110 (50%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G   ++ ++  E++ +G  P    YN ++  + K   L+ A      M+  G+KPD  T+
Sbjct: 306 GRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTY 365

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEE 331
           + LID++  +GR + A  +   M+ S   P +  Y+ ++ S   + +W++
Sbjct: 366 SLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQK 415


>ref|XP_002306972.1| predicted protein [Populus trichocarpa] gi|222856421|gb|EEE93968.1|
           predicted protein [Populus trichocarpa]
          Length = 709

 Score =  193 bits (491), Expect = 1e-47
 Identities = 83/115 (72%), Positives = 102/115 (88%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G+WQKSF VLREM+NSGV PDR FYNVMIDTFGK+NCL+HA+ATF+RM +EGI+PD VTW
Sbjct: 424 GEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTW 483

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLL 346
           NTLID HC++G+HD+AEELF  M + G+SPC TT+NIMINS G QE+W+++KNLL
Sbjct: 484 NTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLL 538



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/105 (33%), Positives = 58/105 (55%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G   ++  +  EM   G SP    +N+MI++FG     +        M+++G+ P++VT+
Sbjct: 494 GKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTY 553

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQ 316
            TLID + KSGR + A E    M+ +G  P +T YN +IN+  Q+
Sbjct: 554 TTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQR 598



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/113 (30%), Positives = 58/113 (51%)
 Frame = +2

Query: 8   WQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNT 187
           W    ++L  M++ G+ P+   Y  +ID +GK      AI   + MKA G+KP +  +N 
Sbjct: 531 WDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNA 590

Query: 188 LIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLL 346
           LI+++ + G  ++A   F AM+  G  P     N +IN+ G+  +  E   +L
Sbjct: 591 LINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVL 643



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/114 (24%), Positives = 62/114 (54%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           G +  +   L +MK +G+ P    YN +I+ + +    E A++ F  M+ +G+KP  +  
Sbjct: 564 GRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLAL 623

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNL 343
           N+LI++  +  R  +A  +   M+++   P   TY  ++ +L + EK++++ ++
Sbjct: 624 NSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSV 677



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/115 (30%), Positives = 55/115 (47%)
 Frame = +2

Query: 2   GDWQKSFSVLREMKNSGVSPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTW 181
           GD  K+   L  ++ SG+S        +I   G       A A FE M+  G+KP    +
Sbjct: 284 GDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAY 343

Query: 182 NTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLL 346
           N L+  + K+G    AE +   M+ SG SP   TY+ +I++ G   +WE  + +L
Sbjct: 344 NALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVL 398