BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040038
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-15
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    74   3e-15
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    76   7e-15
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    72   2e-14
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    72   3e-14

>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 84.3 bits (207), Expect(2) = 2e-15
 Identities = 40/87 (45%), Positives = 62/87 (71%)
 Frame = -2

Query: 309 QLDENTKNLLVREVMRDEIIECLANIDHDKAPGSDGFSALFFKAVWRIVGDDFVKAVRNF 130
           +L    +++L + V R EI   + ++ ++KAPG DGF+A FFK +W IVG+D + AVR+ 
Sbjct: 401 KLSSTQQHVLAQVVTRKEIKHAMFSLKNNKAPGLDGFNAGFFKRMWHIVGEDVINAVRSL 460

Query: 129 FRSGRILQEVNATCITLIPKVLSPNLL 49
           F++ R+L+E+NAT I+LIPKV +P  L
Sbjct: 461 FQTRRMLKEMNATSISLIPKVANPTRL 487



 Score = 22.7 bits (47), Expect(2) = 2e-15
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 50  YRPIACCNVI 21
           +RPI+CCN +
Sbjct: 490 FRPISCCNTV 499


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 73.9 bits (180), Expect(2) = 3e-15
 Identities = 34/88 (38%), Positives = 57/88 (64%)
 Frame = -2

Query: 333  EMGDI*VAQLDENTKNLLVREVMRDEIIECLANIDHDKAPGSDGFSALFFKAVWRIVGDD 154
            ++ D+   +  E    LL R V  +EI + L ++ +DK+PG DGF++ FFKA W I+G++
Sbjct: 840  DLQDLLPFRCSETEHELLTRVVTAEEIKKVLFSMPNDKSPGPDGFTSEFFKATWEILGNE 899

Query: 153  FVKAVRNFFRSGRILQEVNATCITLIPK 70
            F+ A+++FF  G + + +N T + LIPK
Sbjct: 900  FILAIQSFFAKGFLPKGINTTILALIPK 927



 Score = 32.3 bits (72), Expect(2) = 3e-15
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = -3

Query: 50  YRPIACCNVIHKCITK 3
           YRPI+CCNVI+K I+K
Sbjct: 937 YRPISCCNVIYKVISK 952


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 75.9 bits (185), Expect(2) = 7e-15
 Identities = 35/78 (44%), Positives = 51/78 (65%)
 Frame = -2

Query: 303 DENTKNLLVREVMRDEIIECLANIDHDKAPGSDGFSALFFKAVWRIVGDDFVKAVRNFFR 124
           DENT+ LL  EV   +I      +  +K+PG DG+++ FFK  W IVG   + AV+ FFR
Sbjct: 435 DENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFR 494

Query: 123 SGRILQEVNATCITLIPK 70
           SGR+L + N+T +T++PK
Sbjct: 495 SGRLLGQWNSTAVTMVPK 512



 Score = 29.3 bits (64), Expect(2) = 7e-15
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -3

Query: 50  YRPIACCNVIHKCITK 3
           +RPI+CCN I+K I+K
Sbjct: 522 FRPISCCNAIYKVISK 537


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 72.0 bits (175), Expect(2) = 2e-14
 Identities = 32/71 (45%), Positives = 49/71 (69%)
 Frame = -2

Query: 282 LVREVMRDEIIECLANIDHDKAPGSDGFSALFFKAVWRIVGDDFVKAVRNFFRSGRILQE 103
           L+R V  +EI + L  +  DK+PG DG+++ FFKA W I+GD+F  AV++FF  G + + 
Sbjct: 449 LIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKG 508

Query: 102 VNATCITLIPK 70
           +N+T + LIPK
Sbjct: 509 INSTILALIPK 519



 Score = 31.6 bits (70), Expect(2) = 2e-14
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = -3

Query: 50  YRPIACCNVIHKCITK 3
           YRPI+CCNV++K I+K
Sbjct: 529 YRPISCCNVLYKVISK 544


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1529

 Score = 71.6 bits (174), Expect(2) = 3e-14
 Identities = 32/74 (43%), Positives = 52/74 (70%)
 Frame = -2

Query: 291 KNLLVREVMRDEIIECLANIDHDKAPGSDGFSALFFKAVWRIVGDDFVKAVRNFFRSGRI 112
           +N+L REV  +EI + L  + ++K+PG DG+++ FFKA W + G DF+ A+++FF  G +
Sbjct: 743 QNILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFL 802

Query: 111 LQEVNATCITLIPK 70
            + +NAT + LIPK
Sbjct: 803 PKGLNATILALIPK 816



 Score = 31.6 bits (70), Expect(2) = 3e-14
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = -3

Query: 50  YRPIACCNVIHKCITK 3
           YRPI+CCNV++K I+K
Sbjct: 826 YRPISCCNVLYKVISK 841