BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040036
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003976685.1| PREDICTED: splicing factor 3B subunit 3-like...    58   9e-07
ref|NP_001135066.1| splicing factor 3B subunit 3 [Salmo salar] g...    58   9e-07
ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like...    57   1e-06
emb|CAF93045.1| unnamed protein product [Tetraodon nigroviridis]       57   1e-06
ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like...    57   1e-06

>ref|XP_003976685.1| PREDICTED: splicing factor 3B subunit 3-like, partial [Takifugu
           rubripes]
          Length = 1020

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -1

Query: 140 TFGDVFHVLFTETLGKSGCGRIVPAQFLGVDPKGRAVMIG--EKQ 12
           T  ++F  +  ET GKSGC RIVP QFL VDPKGRAVMIG  EKQ
Sbjct: 94  TSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMIGAIEKQ 138


>ref|NP_001135066.1| splicing factor 3B subunit 3 [Salmo salar]
           gi|209738402|gb|ACI70070.1| Splicing factor 3B subunit 3
           [Salmo salar]
          Length = 107

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -1

Query: 131 DVFHVLFTETLGKSGCGRIVPAQFLGVDPKGRAVMIGEKQIG 6
           ++F  +  ET GKSGC RIVP QFL VDPKGRAVMIG+   G
Sbjct: 41  NMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMIGKSAQG 82


>ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio]
           gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName:
           Full=Splicing factor 3B subunit 3
          Length = 1217

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
 Frame = -1

Query: 131 DVFHVLFTETLGKSGCGRIVPAQFLGVDPKGRAVMIG--EKQ 12
           ++F  +  ET GKSGC RIVP QFL VDPKGRAVMIG  EKQ
Sbjct: 97  NMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMIGATEKQ 138


>emb|CAF93045.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1171

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
 Frame = -1

Query: 131 DVFHVLFTETLGKSGCGRIVPAQFLGVDPKGRAVMIG--EKQ 12
           ++F  +  ET GKSGC RIVP QFL VDPKGRAVMIG  EKQ
Sbjct: 97  NMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMIGAIEKQ 138


>ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like [Oreochromis
           niloticus]
          Length = 1217

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
 Frame = -1

Query: 131 DVFHVLFTETLGKSGCGRIVPAQFLGVDPKGRAVMIG--EKQ 12
           ++F  +  ET GKSGC RIVP QFL VDPKGRAVMIG  EKQ
Sbjct: 97  NMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMIGAIEKQ 138