BLASTX nr result
ID: Coptis21_contig00040027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00040027
(648 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253... 286 2e-75
emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera] 284 9e-75
emb|CBI27342.3| unnamed protein product [Vitis vinifera] 283 3e-74
ref|XP_002327568.1| predicted protein [Populus trichocarpa] gi|2... 282 4e-74
ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinu... 274 9e-72
>ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
Length = 1023
Score = 286 bits (733), Expect = 2e-75
Identities = 137/216 (63%), Positives = 169/216 (78%), Gaps = 2/216 (0%)
Frame = -2
Query: 644 SRGLPVVEENDVLRDVFMWGEGIEAGKLRCGD-RTGDPNDTWIDALSPKLLESTALLDIK 468
S P +E+ND+LRDV +WGEGIE G L G R G+ N DAL PKLLEST +LD++
Sbjct: 251 SHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVR 310
Query: 467 NISFGGKHAALVTRQGEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYH 288
IS GGKHAALVT+ GEVF WGE +GGRLGHK+NMD+ PK+VESL G+ ++SVSCGEY
Sbjct: 311 EISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQ 370
Query: 287 TCAVTFDGELYTWGDSGRGAGL-GDLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVVS 111
TCA+T GELYTWGD+G G L G+ R + QW+P ++SGPL+G +S VACGEWH A+VS
Sbjct: 371 TCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVS 430
Query: 110 SSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGL 3
+SGQLFTYG+GTFGVLGHG ++S+ Q KEV+SL GL
Sbjct: 431 TSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGL 466
Score = 80.5 bits (197), Expect = 2e-13
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Frame = -2
Query: 602 DVFMWGEGIEAGKLRCGDRTGDPNDTWIDALSPKLLESTALLDIKNISFGGKHAALVTRQ 423
+++ WG+ +G G+R WI + L T+ I N++ G H A+V+
Sbjct: 379 ELYTWGDN-GSGIDLVGERR--KRSQWIPSRLSGPLNGTS---ISNVACGEWHMAIVSTS 432
Query: 422 GEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYHTCAV----------- 276
G++F++G+ G LGH +S PK VESL+G+ +++ +CG +HT A+
Sbjct: 433 GQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRADRLKFN 492
Query: 275 TFDGELYTWGDSGRG-AGLGDLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVVSSSGQ 99
T G+L+TWGD +G G GD K LP V+ +D V V+CG T ++ G
Sbjct: 493 TKGGKLFTWGDGDKGRLGHGDQERKL--LPTCVAQLVDHDFVQ-VSCGRMLTVGLTCLGT 549
Query: 98 LFTYG 84
++T G
Sbjct: 550 VYTMG 554
>emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
Length = 1156
Score = 284 bits (727), Expect = 9e-75
Identities = 136/216 (62%), Positives = 168/216 (77%), Gaps = 2/216 (0%)
Frame = -2
Query: 644 SRGLPVVEENDVLRDVFMWGEGIEAGKLRCGD-RTGDPNDTWIDALSPKLLESTALLDIK 468
S P +E+ND+LRDV +WGEGIE G L G R G+ N DAL PKLLEST +LD++
Sbjct: 251 SHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVR 310
Query: 467 NISFGGKHAALVTRQGEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYH 288
IS GGKHAALVT+ GEVF WGE +GG LGHK+NMD+ PK+VESL G+ ++SVSCGEY
Sbjct: 311 EISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQ 370
Query: 287 TCAVTFDGELYTWGDSGRGAGL-GDLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVVS 111
TCA+T GELYTWGD+G G L G+ R + QW+P ++SGPL+G +S VACGEWH A+VS
Sbjct: 371 TCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVS 430
Query: 110 SSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGL 3
+SGQLFTYG+GTFGVLGHG ++S+ Q KEV+SL GL
Sbjct: 431 TSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGL 466
Score = 87.0 bits (214), Expect = 3e-15
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 12/198 (6%)
Frame = -2
Query: 602 DVFMWGEGIEAGKLRCGDRTGDPNDTWIDALSPKLLESTALLDIKNISFGGKHAALVTRQ 423
+++ WG+ +G G+R WI + L T+ I N++ G H A+V+
Sbjct: 379 ELYTWGDN-GSGIDLVGERR--KRSQWIPSRLSGPLNGTS---ISNVACGEWHMAIVSTS 432
Query: 422 GEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYHTCAV----------- 276
G++F++G+ G LGH +S PK VESL+G+ +++ +CG +HT A+
Sbjct: 433 GQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRADRLKFN 492
Query: 275 TFDGELYTWGDSGRG-AGLGDLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVVSSSGQ 99
T G+L+TWGD +G G GD K LP V+ +D V V+CG T ++ G
Sbjct: 493 TKGGKLFTWGDGDKGRLGHGDQERKL--LPTCVAQLVDHDFVQ-VSCGRMLTVGLTCLGT 549
Query: 98 LFTYGEGTFGVLGHGNVK 45
++T G G LG+ K
Sbjct: 550 VYTMGSAVHGQLGNPQAK 567
Score = 60.5 bits (145), Expect = 3e-07
Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
Frame = -2
Query: 599 VFMWGEGIEAGKLRCGDRTGDPNDTWIDALSPKLLESTALLDIKNISFGGKHAALVTRQG 420
+F WG+G + G+L GD+ L P + D +S G +T G
Sbjct: 498 LFTWGDG-DKGRLGHGDQERK--------LLPTCVAQLVDHDFVQVSCGRMLTVGLTCLG 548
Query: 419 EVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYHTCAVTFDGELYTWGDS 240
V++ G G+LG+ D S + L ++ +S G YH A+T G LYTWG
Sbjct: 549 TVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYHVAALTSKGSLYTWGMG 608
Query: 239 GRG-AGLGDLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVV 114
G GLGD ++ P V D V +ACG TA +
Sbjct: 609 ANGQLGLGDTEDRNS--PAVVEALRDR-QVESIACGSGFTAAI 648
>emb|CBI27342.3| unnamed protein product [Vitis vinifera]
Length = 925
Score = 283 bits (723), Expect = 3e-74
Identities = 135/210 (64%), Positives = 165/210 (78%), Gaps = 2/210 (0%)
Frame = -2
Query: 626 VEENDVLRDVFMWGEGIEAGKLRCGD-RTGDPNDTWIDALSPKLLESTALLDIKNISFGG 450
V ND+LRDV +WGEGIE G L G R G+ N DAL PKLLEST +LD++ IS GG
Sbjct: 205 VSNNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVREISLGG 264
Query: 449 KHAALVTRQGEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYHTCAVTF 270
KHAALVT+ GEVF WGE +GGRLGHK+NMD+ PK+VESL G+ ++SVSCGEY TCA+T
Sbjct: 265 KHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTH 324
Query: 269 DGELYTWGDSGRGAGL-GDLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVVSSSGQLF 93
GELYTWGD+G G L G+ R + QW+P ++SGPL+G +S VACGEWH A+VS+SGQLF
Sbjct: 325 SGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLF 384
Query: 92 TYGEGTFGVLGHGNVKSMYQAKEVDSLKGL 3
TYG+GTFGVLGHG ++S+ Q KEV+SL GL
Sbjct: 385 TYGDGTFGVLGHGKLESISQPKEVESLSGL 414
Score = 80.5 bits (197), Expect = 2e-13
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Frame = -2
Query: 602 DVFMWGEGIEAGKLRCGDRTGDPNDTWIDALSPKLLESTALLDIKNISFGGKHAALVTRQ 423
+++ WG+ +G G+R WI + L T+ I N++ G H A+V+
Sbjct: 327 ELYTWGDN-GSGIDLVGERR--KRSQWIPSRLSGPLNGTS---ISNVACGEWHMAIVSTS 380
Query: 422 GEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYHTCAV----------- 276
G++F++G+ G LGH +S PK VESL+G+ +++ +CG +HT A+
Sbjct: 381 GQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRADRLKFN 440
Query: 275 TFDGELYTWGDSGRG-AGLGDLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVVSSSGQ 99
T G+L+TWGD +G G GD K LP V+ +D V V+CG T ++ G
Sbjct: 441 TKGGKLFTWGDGDKGRLGHGDQERKL--LPTCVAQLVDHDFVQ-VSCGRMLTVGLTCLGT 497
Query: 98 LFTYG 84
++T G
Sbjct: 498 VYTMG 502
>ref|XP_002327568.1| predicted protein [Populus trichocarpa] gi|222836122|gb|EEE74543.1|
predicted protein [Populus trichocarpa]
Length = 973
Score = 282 bits (721), Expect = 4e-74
Identities = 130/216 (60%), Positives = 171/216 (79%), Gaps = 2/216 (0%)
Frame = -2
Query: 644 SRGLPVVEENDVLRDVFMWGEGIEAGKLRCGDRT-GDPNDTWIDALSPKLLESTALLDIK 468
+ G P E+ D+L+DV +WGEG+E G + C D G N +DAL PKLLEST +LD+
Sbjct: 249 NHGSPRTEKKDILKDVLIWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVMLDVT 308
Query: 467 NISFGGKHAALVTRQGEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYH 288
NIS G KHAAL+T++GEVF WGE + G+LGHK++MD+S PK+VESL+G+H++SV+CGEY
Sbjct: 309 NISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQ 368
Query: 287 TCAVTFDGELYTWGDSGRGAGLG-DLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVVS 111
TCA+T GELY WG++ GA LG + R++ QWLP ++SGPL G+ + VACG+WHTA+VS
Sbjct: 369 TCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVS 428
Query: 110 SSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGL 3
SSGQLFTYG+G+FGVLGHGN+ S+ Q KEV+SLKGL
Sbjct: 429 SSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGL 464
Score = 97.4 bits (241), Expect = 2e-18
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 61/261 (23%)
Frame = -2
Query: 602 DVFMWGEGIEAGKLRCGDRTGDPNDTWIDALSPKLLESTALLDIKNISFGGKHAALVTRQ 423
+++ WGE L C +R+ W+ L +L N++ G H A+V+
Sbjct: 377 ELYAWGENKYGANLGCEERS---RSQWLPRRISGPLTGVCIL---NVACGDWHTAIVSSS 430
Query: 422 GEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYHTCAVT---------- 273
G++F++G+ + G LGH + +S PK VESL G+ ++SV+CG +HT A+
Sbjct: 431 GQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFKFN 490
Query: 272 -FDGELYTWGDSGRGA-GLGDLRNK------------------CQWL------------- 192
G+L+TWGD +G G DL K C +
Sbjct: 491 GVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLTVALTNTGKVYT 550
Query: 191 -----------PHK-------VSGPLDGIHVSGVACGEWHTAVVSSSGQLFTYGEGTFGV 66
PH V G L V ++ G +H A ++SSG L+T+G+GT G
Sbjct: 551 MGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQ 610
Query: 65 LGHGNVKSMYQAKEVDSLKGL 3
LG GNV+ V++L+ +
Sbjct: 611 LGLGNVEDRNFPTLVEALRDM 631
Score = 63.9 bits (154), Expect = 2e-08
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Frame = -2
Query: 617 NDVLRDVFMWGEGIEAGKLRCGDRTGDPNDTWIDALSPKLLESTALLDIKNISFGGKHAA 438
N V +F WG+G + G+L D L P + LD +S G
Sbjct: 490 NGVGGKLFTWGDG-DKGRLGHADLE--------KKLLPTCVAQLVELDFDQVSCGRMLTV 540
Query: 437 LVTRQGEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYHTCAVTFDGEL 258
+T G+V++ G G+LG+ D S + L ++ +S G YH A+T G L
Sbjct: 541 ALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSL 600
Query: 257 YTWGDSGRG-AGLGDLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVV 114
YTWG G GLG++ ++ P V L + V +ACG TA +
Sbjct: 601 YTWGKGTNGQLGLGNVEDRN--FPTLVEA-LRDMQVQSIACGSNLTAAI 646
>ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534074|gb|EEF35792.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 1086
Score = 274 bits (701), Expect = 9e-72
Identities = 129/214 (60%), Positives = 168/214 (78%), Gaps = 2/214 (0%)
Frame = -2
Query: 638 GLPVVEENDVLRDVFMWGEGIEAGKLR-CGDRTGDPNDTWIDALSPKLLESTALLDIKNI 462
G + +ND L+DV MWGEG+E G + R G+ + +DAL PKLLESTA+LD+++I
Sbjct: 256 GCTQIGKNDSLKDVLMWGEGVEGGNIGGMVQRLGNQSVMQVDALVPKLLESTAMLDVRSI 315
Query: 461 SFGGKHAALVTRQGEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYHTC 282
S G KHAAL+T++GEVF WG+ + G+LGHK+NMD+ PK+VESL+ +H++SV CGEY TC
Sbjct: 316 SLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQTC 375
Query: 281 AVTFDGELYTWGDSGRGAGLGD-LRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVVSSS 105
A+T GELYTWGD+ GA L D +R + QWLP+K+ GPLDGI +S VACGEWHTA+VS S
Sbjct: 376 ALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEWHTAIVSLS 435
Query: 104 GQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLKGL 3
GQLFTYG+GTFGVLGHG+++S+ KEV SL+GL
Sbjct: 436 GQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGL 469
Score = 87.0 bits (214), Expect = 3e-15
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Frame = -2
Query: 602 DVFMWGEGIEAGKLRCGDRTGDPNDTWIDALSPKLLESTALLDIKNISFGGKHAALVTRQ 423
+++ WG+ L RT W L KL + I ++ G H A+V+
Sbjct: 382 ELYTWGDNKNGANLTDEMRT---RSQW---LPYKLFGPLDGITISKVACGEWHTAIVSLS 435
Query: 422 GEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYHTCAV----------- 276
G++F++G+ G LGH +S PK V SL G+ ++SV+CG +HT A+
Sbjct: 436 GQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSWHTAAIVDIIADRFKFN 495
Query: 275 TFDGELYTWGDSGRG-AGLGDLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVVSSSGQ 99
G+L+TWGD +G G D+ K +P V+ +D + V+CG T ++++G+
Sbjct: 496 AVGGKLFTWGDGDKGRLGHSDMEKKL--VPTCVAKLVDYDFIR-VSCGRMLTVALTNTGK 552
Query: 98 LFTYGEGTFGVLGHGNVK 45
++T G G LG+ K
Sbjct: 553 VYTMGSSVHGQLGNPQAK 570
Score = 82.4 bits (202), Expect = 7e-14
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Frame = -2
Query: 506 PKLLESTALLDIKNISFGGKHAALVTR-----------QGEVFSWGEENGGRLGHKINMD 360
PK + S L +K+++ G H A + G++F+WG+ + GRLGH
Sbjct: 460 PKEVASLRGLSVKSVACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEK 519
Query: 359 LSCPKLVESLNGIHMESVSCGEYHTCAVTFDGELYTWGDSGRGAGLGDLRNKCQWLPHKV 180
P V L VSCG T A+T G++YT G S G LG+ + K + + V
Sbjct: 520 KLVPTCVAKLVDYDFIRVSCGRMLTVALTNTGKVYTMGSSVHGQ-LGNPQAKDKSITI-V 577
Query: 179 SGPLDGIHVSGVACGEWHTAVVSSSGQLFTYGEGTFGVLGHGNVKSMYQAKEVDSLK 9
G L V ++ G +H AV++S G ++T+G+G G LG GN++ V++L+
Sbjct: 578 EGKLKEEFVKEISSGSYHVAVLTSGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALR 634
Score = 60.5 bits (145), Expect = 3e-07
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 1/169 (0%)
Frame = -2
Query: 617 NDVLRDVFMWGEGIEAGKLRCGDRTGDPNDTWIDALSPKLLESTALLDIKNISFGGKHAA 438
N V +F WG+G + G+L D L P + D +S G
Sbjct: 495 NAVGGKLFTWGDG-DKGRLGHSDME--------KKLVPTCVAKLVDYDFIRVSCGRMLTV 545
Query: 437 LVTRQGEVFSWGEENGGRLGHKINMDLSCPKLVESLNGIHMESVSCGEYHTCAVTFDGEL 258
+T G+V++ G G+LG+ D S + L ++ +S G YH +T G +
Sbjct: 546 ALTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAVLTSGGNV 605
Query: 257 YTWGDSGRG-AGLGDLRNKCQWLPHKVSGPLDGIHVSGVACGEWHTAVV 114
YTWG G G GLG++ ++ P V D V +ACG TA +
Sbjct: 606 YTWGKGGNGQLGLGNIEDRNS--PTYVEALRDR-EVESIACGSNLTAAI 651