BLASTX nr result

ID: Coptis21_contig00040013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040013
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632058.1| PREDICTED: probable pectinesterase/pectinest...    94   2e-17
ref|XP_002527752.1| Pectinesterase-2 precursor, putative [Ricinu...    90   2e-16
ref|NP_191460.1| pectinesterase 35 [Arabidopsis thaliana] gi|753...    87   1e-15
emb|CBI39447.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002878254.1| pectinesterase family protein [Arabidopsis l...    80   2e-13

>ref|XP_003632058.1| PREDICTED: probable pectinesterase/pectinesterase inhibitor 35-like
           [Vitis vinifera]
          Length = 553

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 53/104 (50%), Positives = 68/104 (65%), Gaps = 3/104 (2%)
 Frame = +2

Query: 20  LIHATLQSNIQHVSNSLVMHKSIVSAKTL-KDSTGG--RRLLSDDFPTWVSTGERKLLES 190
           L+    Q+    +SNSL +H S   +K   + +T G  RRLLSD FP WV+  ERKLLE+
Sbjct: 182 LMRPMAQNLTYSISNSLALHMSTRPSKEAQRTNTAGHHRRLLSDRFPGWVTAAERKLLEA 241

Query: 191 SIKDIEVNAVVAMDGTGTHRTISEALAFASLVGGGGRTVIHVTA 322
           S+++I   AVVA DG+GTH+TI EALA    + G GRTVIHV A
Sbjct: 242 SVEEIGATAVVAKDGSGTHKTIGEALAMVVTLEGEGRTVIHVKA 285


>ref|XP_002527752.1| Pectinesterase-2 precursor, putative [Ricinus communis]
           gi|223532839|gb|EEF34613.1| Pectinesterase-2 precursor,
           putative [Ricinus communis]
          Length = 583

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 6/103 (5%)
 Frame = +2

Query: 32  TLQSNIQHVSNSLVMHKSIVSAKTLKDSTGGRRLLS-DDFPTWVSTGERKLLESSIKDIE 208
           T ++  QH+SNSL ++ S     T + + GGR+LLS DDFP WVS  ERKLLE+ + +I+
Sbjct: 211 TARNLSQHISNSLALYMSHYY-NTKESNKGGRKLLSGDDFPAWVSESERKLLETPVAEIK 269

Query: 209 VNAVVAMDGTGTHRTISEALAFA---SLV--GGGGRTVIHVTA 322
            +AVVA DG+GTH TI EA+A     SL   GGGGR VI+V A
Sbjct: 270 AHAVVAKDGSGTHTTIGEAIAEVMSYSLAGEGGGGRNVIYVKA 312


>ref|NP_191460.1| pectinesterase 35 [Arabidopsis thaliana]
           gi|75311708|sp|Q9LYT5.1|PME35_ARATH RecName:
           Full=Probable pectinesterase/pectinesterase inhibitor
           35; Includes: RecName: Full=Pectinesterase inhibitor 35;
           AltName: Full=Pectin methylesterase inhibitor 35;
           Includes: RecName: Full=Pectinesterase 35; Short=PE 35;
           AltName: Full=Pectin methylesterase 35; Short=AtPME35;
           Flags: Precursor gi|7529744|emb|CAB86929.1|
           pectinesterase precursor-like protein [Arabidopsis
           thaliana] gi|16974625|gb|AAL31215.1| AT3g59010/F17J16_60
           [Arabidopsis thaliana] gi|24111417|gb|AAN46858.1|
           At3g59010/F17J16_60 [Arabidopsis thaliana]
           gi|332646339|gb|AEE79860.1| pectinesterase 35
           [Arabidopsis thaliana]
          Length = 529

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/91 (53%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
 Frame = +2

Query: 56  VSNSLVMHKSIVSAKTLKDS-TGGRRLLSD-DFPTWVSTGERKLLESSIKDIEVNAVVAM 229
           ++NSL M  S     +   + TGGR+LLSD DFPTWVS+ +RKLLE+S++++  +AVVA 
Sbjct: 174 LTNSLDMFVSDKQKSSSSSNLTGGRKLLSDHDFPTWVSSSDRKLLEASVEELRPHAVVAA 233

Query: 230 DGTGTHRTISEALAFASLVGGGGRTVIHVTA 322
           DG+GTH +++EAL  ASL  G GR+VIH+TA
Sbjct: 234 DGSGTHMSVAEAL--ASLEKGSGRSVIHLTA 262


>emb|CBI39447.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/94 (48%), Positives = 60/94 (63%)
 Frame = +2

Query: 41  SNIQHVSNSLVMHKSIVSAKTLKDSTGGRRLLSDDFPTWVSTGERKLLESSIKDIEVNAV 220
           S+I   S++        ++ T   +   RRLLSD FP WV+  ERKLLE+S+++I   AV
Sbjct: 71  SSIFQCSSASTKRDQPTNSPTTNTAGHHRRLLSDRFPGWVTAAERKLLEASVEEIGATAV 130

Query: 221 VAMDGTGTHRTISEALAFASLVGGGGRTVIHVTA 322
           VA DG+GTH+TI EALA    + G GRTVIHV A
Sbjct: 131 VAKDGSGTHKTIGEALAMVVTLEGEGRTVIHVKA 164


>ref|XP_002878254.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324092|gb|EFH54513.1| pectinesterase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 525

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/94 (52%), Positives = 66/94 (70%), Gaps = 5/94 (5%)
 Frame = +2

Query: 56  VSNSLVMHKSIVSAKTLKDS----TGGRRLLSD-DFPTWVSTGERKLLESSIKDIEVNAV 220
           ++NSL M    VS K    S    TGGR+LLS+ DFP+W S  +RKLLE+S++++  +AV
Sbjct: 170 LTNSLDM---FVSDKRKSSSSSRLTGGRKLLSEHDFPSWFSMSDRKLLEASVEELRPHAV 226

Query: 221 VAMDGTGTHRTISEALAFASLVGGGGRTVIHVTA 322
           VA DG+GTH +I+EAL  ASL  G GR+VIH+ A
Sbjct: 227 VAADGSGTHMSIAEAL--ASLEKGSGRSVIHLAA 258


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