BLASTX nr result
ID: Coptis21_contig00040010
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00040010 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN65440.1| hypothetical protein VITISV_011417 [Vitis vinifera] 119 3e-25 ref|XP_002320765.1| AP2/ERF domain-containing transcription fact... 117 1e-24 ref|XP_002511793.1| hypothetical protein RCOM_1613750 [Ricinus c... 117 1e-24 ref|XP_002301322.1| AP2/ERF domain-containing transcription fact... 113 2e-23 ref|XP_003529962.1| PREDICTED: ethylene-responsive transcription... 108 6e-22 >emb|CAN65440.1| hypothetical protein VITISV_011417 [Vitis vinifera] Length = 345 Score = 119 bits (297), Expect = 3e-25 Identities = 65/104 (62%), Positives = 73/104 (70%), Gaps = 2/104 (1%) Frame = +3 Query: 96 LRRFVGVRKRPSGRWVAEIKDSSQHVRLWLGTFDTXXXXXXXXXXXXXXXXGENARTNFA 275 +RRFVGVR+RPSGRWVAEIKDSSQ VRLWLGT+DT GENARTNFA Sbjct: 99 VRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARALRGENARTNFA 158 Query: 276 PLSPSSTQSEISPLH--FPESHDGRLGLNFSSLKAKLSKTLQSI 401 P++P+S QS SP F + R GL+FSSLKAKLSK LQSI Sbjct: 159 PVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLKAKLSKNLQSI 202 >ref|XP_002320765.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] gi|222861538|gb|EEE99080.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] Length = 306 Score = 117 bits (293), Expect = 1e-24 Identities = 68/107 (63%), Positives = 74/107 (69%), Gaps = 5/107 (4%) Frame = +3 Query: 96 LRRFVGVRKRPSGRWVAEIKDSSQHVRLWLGTFDTXXXXXXXXXXXXXXXXGENARTNFA 275 LRRFVGVR+RPSGRWVAEIKDSSQ VRLWLGT+DT GENARTNFA Sbjct: 26 LRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARALRGENARTNFA 85 Query: 276 PLSPSSTQSEISP-----LHFPESHDGRLGLNFSSLKAKLSKTLQSI 401 +SP+ QS SP L+ ES D R GL+FSSLKAKLSK LQSI Sbjct: 86 SVSPNLNQSGSSPSSNGGLNMSES-DERHGLSFSSLKAKLSKNLQSI 131 >ref|XP_002511793.1| hypothetical protein RCOM_1613750 [Ricinus communis] gi|223548973|gb|EEF50462.1| hypothetical protein RCOM_1613750 [Ricinus communis] Length = 291 Score = 117 bits (292), Expect = 1e-24 Identities = 64/104 (61%), Positives = 72/104 (69%), Gaps = 2/104 (1%) Frame = +3 Query: 96 LRRFVGVRKRPSGRWVAEIKDSSQHVRLWLGTFDTXXXXXXXXXXXXXXXXGENARTNFA 275 +RRFVGVR+RPSGRWVAEIKDSSQ VRLWLGT+DT GENARTNFA Sbjct: 29 VRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAAKAYDEAARALRGENARTNFA 88 Query: 276 PLSPSSTQSEISPLH--FPESHDGRLGLNFSSLKAKLSKTLQSI 401 ++P+S S SP + F DGR L+FSSLKAKLSK LQSI Sbjct: 89 SVNPNSYHSGSSPSNGGFVSESDGRHSLSFSSLKAKLSKNLQSI 132 >ref|XP_002301322.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] gi|222843048|gb|EEE80595.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] Length = 230 Score = 113 bits (282), Expect = 2e-23 Identities = 64/105 (60%), Positives = 72/105 (68%), Gaps = 4/105 (3%) Frame = +3 Query: 99 RRFVGVRKRPSGRWVAEIKDSSQHVRLWLGTFDTXXXXXXXXXXXXXXXXGENARTNFAP 278 RRFVGVR+RPSGRWVAEIKDSSQ VRLWLGT+D+ G NARTNFA Sbjct: 27 RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDSPEAAARAYDEAARALRGGNARTNFAS 86 Query: 279 LSPSSTQSEISP----LHFPESHDGRLGLNFSSLKAKLSKTLQSI 401 ++PS QS SP + PES DGR L+FSSLKA+LSK LQSI Sbjct: 87 VNPSLNQSGSSPSNGGFNMPES-DGRHSLSFSSLKARLSKNLQSI 130 >ref|XP_003529962.1| PREDICTED: ethylene-responsive transcription factor 4-like [Glycine max] Length = 333 Score = 108 bits (269), Expect = 6e-22 Identities = 60/105 (57%), Positives = 70/105 (66%), Gaps = 3/105 (2%) Frame = +3 Query: 96 LRRFVGVRKRPSGRWVAEIKDSSQHVRLWLGTFDTXXXXXXXXXXXXXXXXGENARTNFA 275 +RRF+GVR+RPSGRWVAEIKDSSQHVRLWLGT+DT GENARTNFA Sbjct: 33 IRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARALRGENARTNFA 92 Query: 276 PLSP---SSTQSEISPLHFPESHDGRLGLNFSSLKAKLSKTLQSI 401 P+S QS + S G+ GL+F+SLKAKLSK LQ+I Sbjct: 93 PVSQVILGQQQSGSNNNLSTGSDIGKHGLSFASLKAKLSKNLQNI 137