BLASTX nr result

ID: Coptis21_contig00040010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00040010
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65440.1| hypothetical protein VITISV_011417 [Vitis vinifera]   119   3e-25
ref|XP_002320765.1| AP2/ERF domain-containing transcription fact...   117   1e-24
ref|XP_002511793.1| hypothetical protein RCOM_1613750 [Ricinus c...   117   1e-24
ref|XP_002301322.1| AP2/ERF domain-containing transcription fact...   113   2e-23
ref|XP_003529962.1| PREDICTED: ethylene-responsive transcription...   108   6e-22

>emb|CAN65440.1| hypothetical protein VITISV_011417 [Vitis vinifera]
          Length = 345

 Score =  119 bits (297), Expect = 3e-25
 Identities = 65/104 (62%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
 Frame = +3

Query: 96  LRRFVGVRKRPSGRWVAEIKDSSQHVRLWLGTFDTXXXXXXXXXXXXXXXXGENARTNFA 275
           +RRFVGVR+RPSGRWVAEIKDSSQ VRLWLGT+DT                GENARTNFA
Sbjct: 99  VRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARALRGENARTNFA 158

Query: 276 PLSPSSTQSEISPLH--FPESHDGRLGLNFSSLKAKLSKTLQSI 401
           P++P+S QS  SP    F    + R GL+FSSLKAKLSK LQSI
Sbjct: 159 PVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLKAKLSKNLQSI 202


>ref|XP_002320765.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222861538|gb|EEE99080.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 306

 Score =  117 bits (293), Expect = 1e-24
 Identities = 68/107 (63%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
 Frame = +3

Query: 96  LRRFVGVRKRPSGRWVAEIKDSSQHVRLWLGTFDTXXXXXXXXXXXXXXXXGENARTNFA 275
           LRRFVGVR+RPSGRWVAEIKDSSQ VRLWLGT+DT                GENARTNFA
Sbjct: 26  LRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARALRGENARTNFA 85

Query: 276 PLSPSSTQSEISP-----LHFPESHDGRLGLNFSSLKAKLSKTLQSI 401
            +SP+  QS  SP     L+  ES D R GL+FSSLKAKLSK LQSI
Sbjct: 86  SVSPNLNQSGSSPSSNGGLNMSES-DERHGLSFSSLKAKLSKNLQSI 131


>ref|XP_002511793.1| hypothetical protein RCOM_1613750 [Ricinus communis]
           gi|223548973|gb|EEF50462.1| hypothetical protein
           RCOM_1613750 [Ricinus communis]
          Length = 291

 Score =  117 bits (292), Expect = 1e-24
 Identities = 64/104 (61%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
 Frame = +3

Query: 96  LRRFVGVRKRPSGRWVAEIKDSSQHVRLWLGTFDTXXXXXXXXXXXXXXXXGENARTNFA 275
           +RRFVGVR+RPSGRWVAEIKDSSQ VRLWLGT+DT                GENARTNFA
Sbjct: 29  VRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAAKAYDEAARALRGENARTNFA 88

Query: 276 PLSPSSTQSEISPLH--FPESHDGRLGLNFSSLKAKLSKTLQSI 401
            ++P+S  S  SP +  F    DGR  L+FSSLKAKLSK LQSI
Sbjct: 89  SVNPNSYHSGSSPSNGGFVSESDGRHSLSFSSLKAKLSKNLQSI 132


>ref|XP_002301322.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222843048|gb|EEE80595.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 230

 Score =  113 bits (282), Expect = 2e-23
 Identities = 64/105 (60%), Positives = 72/105 (68%), Gaps = 4/105 (3%)
 Frame = +3

Query: 99  RRFVGVRKRPSGRWVAEIKDSSQHVRLWLGTFDTXXXXXXXXXXXXXXXXGENARTNFAP 278
           RRFVGVR+RPSGRWVAEIKDSSQ VRLWLGT+D+                G NARTNFA 
Sbjct: 27  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDSPEAAARAYDEAARALRGGNARTNFAS 86

Query: 279 LSPSSTQSEISP----LHFPESHDGRLGLNFSSLKAKLSKTLQSI 401
           ++PS  QS  SP     + PES DGR  L+FSSLKA+LSK LQSI
Sbjct: 87  VNPSLNQSGSSPSNGGFNMPES-DGRHSLSFSSLKARLSKNLQSI 130


>ref|XP_003529962.1| PREDICTED: ethylene-responsive transcription factor 4-like [Glycine
           max]
          Length = 333

 Score =  108 bits (269), Expect = 6e-22
 Identities = 60/105 (57%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
 Frame = +3

Query: 96  LRRFVGVRKRPSGRWVAEIKDSSQHVRLWLGTFDTXXXXXXXXXXXXXXXXGENARTNFA 275
           +RRF+GVR+RPSGRWVAEIKDSSQHVRLWLGT+DT                GENARTNFA
Sbjct: 33  IRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARALRGENARTNFA 92

Query: 276 PLSP---SSTQSEISPLHFPESHDGRLGLNFSSLKAKLSKTLQSI 401
           P+S       QS  +      S  G+ GL+F+SLKAKLSK LQ+I
Sbjct: 93  PVSQVILGQQQSGSNNNLSTGSDIGKHGLSFASLKAKLSKNLQNI 137


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