BLASTX nr result

ID: Coptis21_contig00039965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039965
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268384.1| PREDICTED: uncharacterized protein LOC100244...   168   4e-40
ref|XP_002513247.1| conserved hypothetical protein [Ricinus comm...   150   1e-34
ref|XP_004146402.1| PREDICTED: uncharacterized protein LOC101220...   141   6e-32
ref|XP_003522461.1| PREDICTED: uncharacterized protein LOC100805...   138   4e-31
ref|XP_003528080.1| PREDICTED: uncharacterized protein LOC100782...   136   2e-30

>ref|XP_002268384.1| PREDICTED: uncharacterized protein LOC100244237 [Vitis vinifera]
          Length = 714

 Score =  168 bits (426), Expect = 4e-40
 Identities = 81/124 (65%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
 Frame = -3

Query: 374 ALVSNNGSNLQVQWDQVVEFALFKEDIVQRNN-SFSTITICEALFYGFRILLSRSLSKFK 198
           AL+S  G +LQ+ WDQVVEFALFK DI+  N   FS+ TICEALFYGF ILLSR LSK+ 
Sbjct: 157 ALISKTGRDLQIHWDQVVEFALFKPDIMVGNELGFSSNTICEALFYGFHILLSRCLSKYS 216

Query: 197 GVTGDSVYLLVLDSKFGGVIKLGGDLSKLETNSSCSYHGIIEWMKVHADISISPVERIWN 18
            V  DSV+LLV+DSKFGGV+K GG+LSKLE N++  Y  + EW+K+HA++S+SPV+RIWN
Sbjct: 217 LVNSDSVFLLVVDSKFGGVVKFGGNLSKLELNTTNPYQSVAEWIKLHAEVSVSPVDRIWN 276

Query: 17  KLGN 6
           KLGN
Sbjct: 277 KLGN 280


>ref|XP_002513247.1| conserved hypothetical protein [Ricinus communis]
           gi|223547621|gb|EEF49115.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 691

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/124 (58%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
 Frame = -3

Query: 374 ALVSNNGSNLQVQWDQVVEFALFKEDIVQRNN-SFSTITICEALFYGFRILLSRSLSKFK 198
           AL++ +G +LQV W QV+E ALF+ DI+  N    S   ICEALFYG  IL++RSLSK  
Sbjct: 169 ALITKSGRDLQVHWGQVMELALFRPDILSDNELKLSASCICEALFYGIHILIARSLSKLN 228

Query: 197 GVTGDSVYLLVLDSKFGGVIKLGGDLSKLETNSSCSYHGIIEWMKVHADISISPVERIWN 18
            V  DSV+LLV DSKFGGV+KLGGDLS+LE  S+  Y  +IEW++ HA++ +S VER+WN
Sbjct: 229 TVGSDSVFLLVFDSKFGGVVKLGGDLSRLELKSTNLYQSVIEWIRYHAEVGVSSVERVWN 288

Query: 17  KLGN 6
           KLGN
Sbjct: 289 KLGN 292


>ref|XP_004146402.1| PREDICTED: uncharacterized protein LOC101220220 [Cucumis sativus]
          Length = 627

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/124 (54%), Positives = 91/124 (73%), Gaps = 2/124 (1%)
 Frame = -3

Query: 371 LVSNNGSNLQVQWDQVVEFALFKEDIVQRNN-SFSTITICEALFYGFRILLSRSLSKFKG 195
           L+S  G  L  +WDQVV+FALFK  I+  +    S   +CEALFYG  +L+SRSLSK   
Sbjct: 74  LISRAGDELHARWDQVVQFALFKPSILSEDGLKLSARVVCEALFYGLHLLISRSLSKIST 133

Query: 194 VTG-DSVYLLVLDSKFGGVIKLGGDLSKLETNSSCSYHGIIEWMKVHADISISPVERIWN 18
           +   DSV++L+LDSK+GGVIKLGGDLS+L+ NS+  Y   ++WM+ +A++ +SPV+RIWN
Sbjct: 134 IRNYDSVFVLILDSKYGGVIKLGGDLSQLDINSANPYQSAVDWMRNYAEVCVSPVDRIWN 193

Query: 17  KLGN 6
           KLGN
Sbjct: 194 KLGN 197


>ref|XP_003522461.1| PREDICTED: uncharacterized protein LOC100805045 [Glycine max]
          Length = 717

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/126 (54%), Positives = 91/126 (72%), Gaps = 2/126 (1%)
 Frame = -3

Query: 374 ALVSNNGSNLQVQWDQVVEFALFKEDIVQRNNS-FSTITICEALFYGFRILLSRSLSKFK 198
           AL+S   ++ + +WD +VEFALFK ++   N+S  S  TICEALFYGF +L+SRSLSK  
Sbjct: 165 ALISKTATDSKFKWDHMVEFALFKSEVFLDNDSRLSASTICEALFYGFHVLVSRSLSKII 224

Query: 197 GVTGDSVYLLVLDSKFGGVIKLGGDLSKLE-TNSSCSYHGIIEWMKVHADISISPVERIW 21
            +  DSV+LLVLDSK G V+K  GDL KL+  NSS  Y  + EW+K +A+I ++PVE IW
Sbjct: 225 SINSDSVFLLVLDSKCGAVMKFSGDLGKLDLLNSSDPYLSVAEWIKTYAEICVTPVEPIW 284

Query: 20  NKLGNP 3
           N+LGNP
Sbjct: 285 NRLGNP 290


>ref|XP_003528080.1| PREDICTED: uncharacterized protein LOC100782302 [Glycine max]
          Length = 777

 Score =  136 bits (343), Expect = 2e-30
 Identities = 70/125 (56%), Positives = 90/125 (72%), Gaps = 2/125 (1%)
 Frame = -3

Query: 371 LVSNNGSNLQVQWDQVVEFALFKEDIVQRNNS-FSTITICEALFYGFRILLSRSLSKFKG 195
           L+S   ++ + +WD +VEFALFK ++   N+S  S  TICEALFYGF +L+SRSLSK   
Sbjct: 226 LISKIATDSKFKWDHMVEFALFKPEVFLDNDSRLSASTICEALFYGFHVLVSRSLSKISS 285

Query: 194 VTGDSVYLLVLDSKFGGVIKLGGDLSKLE-TNSSCSYHGIIEWMKVHADISISPVERIWN 18
           V  DSV+LLVLDSK G VIK  GDL KL+  NSS  Y  + EW+K +A+I ++PVE IWN
Sbjct: 286 VNSDSVFLLVLDSKCGVVIKFSGDLGKLDLLNSSDPYLSVAEWIKTNAEICVTPVEPIWN 345

Query: 17  KLGNP 3
           +LGNP
Sbjct: 346 RLGNP 350


Top