BLASTX nr result

ID: Coptis21_contig00039964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039964
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001167879.1| uncharacterized protein LOC100381586 [Zea ma...   122   4e-26
ref|XP_004166103.1| PREDICTED: uncharacterized protein At2g37660...   118   6e-25
ref|XP_002465261.1| hypothetical protein SORBIDRAFT_01g035100 [S...   117   7e-25
ref|XP_004139052.1| PREDICTED: uncharacterized protein At2g37660...   117   1e-24
ref|XP_002298302.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24

>ref|NP_001167879.1| uncharacterized protein LOC100381586 [Zea mays]
           gi|223944601|gb|ACN26384.1| unknown [Zea mays]
           gi|413955704|gb|AFW88353.1| hypothetical protein
           ZEAMMB73_697631 [Zea mays]
          Length = 336

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/69 (82%), Positives = 64/69 (92%)
 Frame = -3

Query: 209 ASLLTRNIKSRILLRDPPKAQNLFGEQDEDILQVRKADTRNPDDLDPSIFEGVTHVICCT 30
           ASLL+RNIKSR+LLRDP KA +LFG+QDE +LQV KADTRNP+DLDP +FEGVTHVICCT
Sbjct: 103 ASLLSRNIKSRLLLRDPEKASSLFGKQDESVLQVYKADTRNPNDLDPQMFEGVTHVICCT 162

Query: 29  GTTAFPSKR 3
           GTTAFPSKR
Sbjct: 163 GTTAFPSKR 171


>ref|XP_004166103.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like
           [Cucumis sativus]
          Length = 340

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/69 (79%), Positives = 62/69 (89%)
 Frame = -3

Query: 209 ASLLTRNIKSRILLRDPPKAQNLFGEQDEDILQVRKADTRNPDDLDPSIFEGVTHVICCT 30
           A+LL RN+K R+LLRDP KA  LFGEQDE++LQV K DTRNP+DLDPSIFEGVTHVICCT
Sbjct: 106 AALLDRNVKLRLLLRDPEKAATLFGEQDENLLQVCKGDTRNPEDLDPSIFEGVTHVICCT 165

Query: 29  GTTAFPSKR 3
           GTTAFPS+R
Sbjct: 166 GTTAFPSRR 174


>ref|XP_002465261.1| hypothetical protein SORBIDRAFT_01g035100 [Sorghum bicolor]
           gi|241919115|gb|EER92259.1| hypothetical protein
           SORBIDRAFT_01g035100 [Sorghum bicolor]
          Length = 337

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/69 (79%), Positives = 63/69 (91%)
 Frame = -3

Query: 209 ASLLTRNIKSRILLRDPPKAQNLFGEQDEDILQVRKADTRNPDDLDPSIFEGVTHVICCT 30
           ASLL+RNIKSR+LLRDP KA +LFG+QD+ +LQV KADTRN +DLDP +FEGVTHVICCT
Sbjct: 106 ASLLSRNIKSRLLLRDPEKASSLFGKQDDSVLQVYKADTRNSNDLDPQMFEGVTHVICCT 165

Query: 29  GTTAFPSKR 3
           GTTAFPSKR
Sbjct: 166 GTTAFPSKR 174


>ref|XP_004139052.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like
           [Cucumis sativus]
          Length = 340

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = -3

Query: 209 ASLLTRNIKSRILLRDPPKAQNLFGEQDEDILQVRKADTRNPDDLDPSIFEGVTHVICCT 30
           A+LL RN+K R+LLRDP KA  LFGEQDE +LQV K DTRNP+DLDPSIFEGVTHVICCT
Sbjct: 106 AALLDRNVKLRLLLRDPEKATTLFGEQDEKLLQVCKGDTRNPEDLDPSIFEGVTHVICCT 165

Query: 29  GTTAFPSKR 3
           GTTAFPS+R
Sbjct: 166 GTTAFPSRR 174


>ref|XP_002298302.1| predicted protein [Populus trichocarpa] gi|222845560|gb|EEE83107.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/92 (65%), Positives = 68/92 (73%)
 Frame = -3

Query: 278 TALSSSKRXXXXXXXXXXXXXXVASLLTRNIKSRILLRDPPKAQNLFGEQDEDILQVRKA 99
           T  SSSK               VA+LL RNIKSR+LLRDP KA  LFG+QDE+ +QV K 
Sbjct: 30  TPPSSSKLVLVVGGSGGVGQLVVAALLNRNIKSRLLLRDPEKAVALFGKQDEEKMQVYKG 89

Query: 98  DTRNPDDLDPSIFEGVTHVICCTGTTAFPSKR 3
           DTRNP+DLDPS+FEGVTHVICCTGTTAFPS+R
Sbjct: 90  DTRNPEDLDPSLFEGVTHVICCTGTTAFPSRR 121


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