BLASTX nr result

ID: Coptis21_contig00039510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039510
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32067.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002267941.1| PREDICTED: microtubule-associated protein SP...   172   3e-41
ref|XP_004146798.1| PREDICTED: microtubule-associated protein TO...   169   3e-40
ref|XP_002520195.1| Microtubule-associated protein TORTIFOLIA1, ...   166   2e-39
ref|XP_003613461.1| Microtubule-associated protein TORTIFOLIA1 [...   158   4e-37

>emb|CBI32067.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  172 bits (435), Expect = 3e-41
 Identities = 87/153 (56%), Positives = 116/153 (75%)
 Frame = +2

Query: 2   TTELETIIKSLTHHDSFASFLTCIYETDSSSKTQVRKQCVRLLGFISIIHGNALTPFVPK 181
           T ELE+I ++LTH DSF+ FL+C+Y TDSS K+ VRKQCVRLLG +S  HG++L+P + K
Sbjct: 42  TAELESIARNLTH-DSFSPFLSCLYGTDSSEKSPVRKQCVRLLGVLSETHGDSLSPHLSK 100

Query: 182 MISNIVKRLHDSDSVVRTACVDSVTTMCSSISKVSFFTLFLKPFMETMLFEQDYNSQMGS 361
           M+SN+V+RL DSDS VR ACVD+V  M S I+K   F+ FLKP  +++L EQDYN Q+GS
Sbjct: 101 MLSNVVRRLRDSDSAVRLACVDAVGVMSSQITKPP-FSAFLKPLTDSILLEQDYNLQIGS 159

Query: 362 TLCLTSAIEACNDPEVVHLQRVLPKFVKLLRSE 460
            LC+ +AIEA  DPE   L ++LP+ +KL +SE
Sbjct: 160 ALCIAAAIEAAPDPEPEQLLKLLPRLLKLAKSE 192


>ref|XP_002267941.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis
           vinifera]
          Length = 654

 Score =  172 bits (435), Expect = 3e-41
 Identities = 87/153 (56%), Positives = 116/153 (75%)
 Frame = +2

Query: 2   TTELETIIKSLTHHDSFASFLTCIYETDSSSKTQVRKQCVRLLGFISIIHGNALTPFVPK 181
           T ELE+I ++LTH DSF+ FL+C+Y TDSS K+ VRKQCVRLLG +S  HG++L+P + K
Sbjct: 43  TAELESIARNLTH-DSFSPFLSCLYGTDSSEKSPVRKQCVRLLGVLSETHGDSLSPHLSK 101

Query: 182 MISNIVKRLHDSDSVVRTACVDSVTTMCSSISKVSFFTLFLKPFMETMLFEQDYNSQMGS 361
           M+SN+V+RL DSDS VR ACVD+V  M S I+K   F+ FLKP  +++L EQDYN Q+GS
Sbjct: 102 MLSNVVRRLRDSDSAVRLACVDAVGVMSSQITKPP-FSAFLKPLTDSILLEQDYNLQIGS 160

Query: 362 TLCLTSAIEACNDPEVVHLQRVLPKFVKLLRSE 460
            LC+ +AIEA  DPE   L ++LP+ +KL +SE
Sbjct: 161 ALCIAAAIEAAPDPEPEQLLKLLPRLLKLAKSE 193


>ref|XP_004146798.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus] gi|449518027|ref|XP_004166045.1| PREDICTED:
           microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus]
          Length = 658

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/151 (56%), Positives = 116/151 (76%)
 Frame = +2

Query: 8   ELETIIKSLTHHDSFASFLTCIYETDSSSKTQVRKQCVRLLGFISIIHGNALTPFVPKMI 187
           ELE+I K+LT+ DSF+SFL+CI+ TD+SSK+ VRKQCV L+G +S  HG+AL+PF+ KMI
Sbjct: 48  ELESIAKALTY-DSFSSFLSCIHNTDASSKSPVRKQCVYLIGLLSQSHGDALSPFLSKMI 106

Query: 188 SNIVKRLHDSDSVVRTACVDSVTTMCSSISKVSFFTLFLKPFMETMLFEQDYNSQMGSTL 367
           S +V+RL DSDS +R+ACVD+   M S I+K   F++FLKP MET+  EQD NSQ+GS L
Sbjct: 107 STVVRRLRDSDSTIRSACVDATALMSSQITKPP-FSVFLKPLMETLTLEQDLNSQIGSAL 165

Query: 368 CLTSAIEACNDPEVVHLQRVLPKFVKLLRSE 460
           CL +A+EA  DP+V  L++ L K  KL ++E
Sbjct: 166 CLAAAVEAAPDPDVSQLRKNLTKLGKLAKNE 196


>ref|XP_002520195.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus
           communis] gi|223540687|gb|EEF42250.1|
           Microtubule-associated protein TORTIFOLIA1, putative
           [Ricinus communis]
          Length = 654

 Score =  166 bits (419), Expect = 2e-39
 Identities = 84/153 (54%), Positives = 108/153 (70%)
 Frame = +2

Query: 2   TTELETIIKSLTHHDSFASFLTCIYETDSSSKTQVRKQCVRLLGFISIIHGNALTPFVPK 181
           TTELETI K+L  HD+F+SFLTCIY TDSS ++ VRK CV LL  +S  HGN+L P   K
Sbjct: 43  TTELETIAKTLATHDAFSSFLTCIYNTDSSCRSPVRKHCVNLLTLLSNSHGNSLAPHFSK 102

Query: 182 MISNIVKRLHDSDSVVRTACVDSVTTMCSSISKVSFFTLFLKPFMETMLFEQDYNSQMGS 361
           MIS + +RLHD DS VR ACV++ T M S I+K  F TL  KP +E M  E+D+N Q+GS
Sbjct: 103 MISTLTRRLHDPDSAVRAACVEATTAMSSQITKPPFSTL-SKPLIEIMTVEKDFNCQIGS 161

Query: 362 TLCLTSAIEACNDPEVVHLQRVLPKFVKLLRSE 460
            LCL +AIEA   PE+  L+++LP+  KL+R +
Sbjct: 162 ALCLAAAIEAAPQPELEMLRKMLPRLGKLVRGD 194


>ref|XP_003613461.1| Microtubule-associated protein TORTIFOLIA1 [Medicago truncatula]
           gi|355514796|gb|AES96419.1| Microtubule-associated
           protein TORTIFOLIA1 [Medicago truncatula]
          Length = 750

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/154 (50%), Positives = 116/154 (75%), Gaps = 1/154 (0%)
 Frame = +2

Query: 2   TTELETIIKSLTHHDSFASFLTCIYETDSSSKTQVRKQCVRLLGFISIIHGNALTPFVPK 181
           T ELE+I K+L +HD+F+SFL+CI+ TDSS+K+ VRKQCV LL  +S  HG+AL+PF+ K
Sbjct: 43  TVELESIAKTL-NHDTFSSFLSCIHNTDSSTKSPVRKQCVNLLTLLSKFHGDALSPFLSK 101

Query: 182 MISNIVKRLHDSDSVVRTACVDSVTTMCSSISKVSFFTLFLKPFMETMLFEQDYNSQMGS 361
           MI+ +++R+HD D+VVR+ACV++V  M   I++ +F   FL+PFME +  EQD N+Q+G 
Sbjct: 102 MIATVLRRIHDPDTVVRSACVEAVAEMSLRITRPAFAVAFLRPFMEALTVEQDVNAQIGG 161

Query: 362 TLCLTSAIEACNDPEVVHLQR-VLPKFVKLLRSE 460
            LCL +A+EA  + +V  L+R  LP+  K+L++E
Sbjct: 162 ALCLAAAVEAAPEVDVELLRRNTLPRLGKVLKTE 195


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