BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039489
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit...    70   1e-10
ref|XP_003527977.1| PREDICTED: F-box/kelch-repeat protein At3g06...    61   1e-07
ref|XP_003598113.1| F-box protein [Medicago truncatula] gi|35548...    61   1e-07
ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|35548...    61   1e-07
ref|XP_002453434.1| hypothetical protein SORBIDRAFT_04g005990 [S...    60   1e-07

>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
          Length = 417

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/64 (50%), Positives = 45/64 (70%)
 Frame = -1

Query: 288 ERRGIESKTDETGHKEVPYLPWEIFFEILLRLPVDTLIECKVVCKDWYALINNPLFIDLH 109
           E R +  K +E   K+VPYLP + F  IL+RLP+++L   ++VCK WY LIN+P+FID H
Sbjct: 18  EERALSKKVEE---KQVPYLPKDCFSNILVRLPIESLPSSRLVCKPWYKLINSPIFIDAH 74

Query: 108 LSQS 97
           L +S
Sbjct: 75  LRRS 78


>ref|XP_003527977.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 376

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/66 (42%), Positives = 40/66 (60%)
 Frame = -1

Query: 252 GHKEVPYLPWEIFFEILLRLPVDTLIECKVVCKDWYALINNPLFIDLHLSQSTRRQQHYR 73
           G K++  LPWE+  EILLRLPV +L+  K VCK W  L+++P F   H  Q + R  H  
Sbjct: 11  GTKKIAILPWELIIEILLRLPVKSLVRFKCVCKSWLCLLSDPHFATSHFEQPSTR-THRL 69

Query: 72  RYVLIP 55
            +++ P
Sbjct: 70  IFIVAP 75


>ref|XP_003598113.1| F-box protein [Medicago truncatula] gi|355487161|gb|AES68364.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
 Frame = -1

Query: 291 KERRGIESKTDETGHK---EVPYLPWEIFFEILLRLPVDTLIECKVVCKDWYALINNPLF 121
           K++R  ++ T  + H     +P+LP+E+  EIL RLPV  L++ +  CK W +LI+NP F
Sbjct: 29  KKKRVTKTLTSPSLHALPLPLPFLPFELIEEILSRLPVKLLLQLRCACKSWSSLISNPKF 88

Query: 120 IDLHLSQSTRRQQH 79
              HLS STR   H
Sbjct: 89  AKKHLSMSTRHVLH 102


>ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|355487157|gb|AES68360.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
 Frame = -1

Query: 291 KERRGIESKTDETGHK---EVPYLPWEIFFEILLRLPVDTLIECKVVCKDWYALINNPLF 121
           K++R  ++ T  + H     +P+LP+E+  EIL RLPV  L++ +  CK W +LI+NP F
Sbjct: 29  KKKRVTKTLTSPSLHALPLPLPFLPFELIEEILSRLPVKLLLQLRCACKSWSSLISNPKF 88

Query: 120 IDLHLSQSTRRQQH 79
              HLS STR   H
Sbjct: 89  AKKHLSMSTRHVLH 102


>ref|XP_002453434.1| hypothetical protein SORBIDRAFT_04g005990 [Sorghum bicolor]
           gi|241933265|gb|EES06410.1| hypothetical protein
           SORBIDRAFT_04g005990 [Sorghum bicolor]
          Length = 400

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
 Frame = -1

Query: 267 KTDETGHKE----VPYLPWEIFFEILLRLPVDTLIECKVVCKDWYALINNPLFIDLHLSQ 100
           KT +TG K      P L  EI  EILLRLPV +L+  + VCK W A+INNP+FI  HL  
Sbjct: 2   KTQKTGTKRKKAPCPQLMEEIIMEILLRLPVKSLLRFRSVCKAWRAMINNPMFIRDHLRH 61

Query: 99  STRRQQHYRRYVLIP 55
           S  + +    +++ P
Sbjct: 62  SASKWEQSPCFIVSP 76