BLASTX nr result

ID: Coptis21_contig00039213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039213
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265276.2| PREDICTED: putative disease resistance RPP13...    85   5e-15
emb|CBI29749.3| unnamed protein product [Vitis vinifera]               85   5e-15
ref|XP_003601846.1| Nucleotide binding site leucine-rich repeat ...    79   4e-13
ref|XP_002513098.1| Disease resistance protein RGA2, putative [R...    78   8e-13
ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13

>ref|XP_002265276.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
            [Vitis vinifera]
          Length = 1425

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/103 (44%), Positives = 65/103 (63%)
 Frame = -1

Query: 313  ENMNEAKRAELQRKKNLHFLELDFGYFDDATKDDIQRMEGVIQALQPHTELEQLVIKGYP 134
            E   +A RA ++ K++L   EL   + D+ T D IQ   GV+  LQPH  L+QL I GYP
Sbjct: 727  ECARDALRANMKDKRHLD--ELSLAWRDEGTNDVIQ--SGVLNNLQPHPNLKQLTIAGYP 782

Query: 133  GSMFPCWMSSESLLSNIVYLRLYSCKHCTQLPALGKLRSLESM 5
            G  FP W+   S LSN+V L L++C++C+ LP LG+L SL+ +
Sbjct: 783  GVAFPDWIGGGSSLSNLVTLLLWTCENCSSLPPLGQLPSLKHL 825


>emb|CBI29749.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/103 (44%), Positives = 65/103 (63%)
 Frame = -1

Query: 313 ENMNEAKRAELQRKKNLHFLELDFGYFDDATKDDIQRMEGVIQALQPHTELEQLVIKGYP 134
           E   +A RA ++ K++L   EL   + D+ T D IQ   GV+  LQPH  L+QL I GYP
Sbjct: 174 ECARDALRANMKDKRHLD--ELSLAWRDEGTNDVIQ--SGVLNNLQPHPNLKQLTIAGYP 229

Query: 133 GSMFPCWMSSESLLSNIVYLRLYSCKHCTQLPALGKLRSLESM 5
           G  FP W+   S LSN+V L L++C++C+ LP LG+L SL+ +
Sbjct: 230 GVAFPDWIGGGSSLSNLVTLLLWTCENCSSLPPLGQLPSLKHL 272


>ref|XP_003601846.1| Nucleotide binding site leucine-rich repeat disease resistance
           protein [Medicago truncatula]
           gi|355490894|gb|AES72097.1| Nucleotide binding site
           leucine-rich repeat disease resistance protein [Medicago
           truncatula]
          Length = 1136

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/102 (38%), Positives = 64/102 (62%)
 Frame = -1

Query: 310 NMNEAKRAELQRKKNLHFLELDFGYFDDATKDDIQRMEGVIQALQPHTELEQLVIKGYPG 131
           N  +A++A L  KK+L+ L L +G + ++    +   E V++AL+PH+ L+   ++GY G
Sbjct: 682 NKEDARKANLIGKKDLNRLYLSWGDYTNSHVSSVDA-ERVLEALEPHSGLKNFGLQGYMG 740

Query: 130 SMFPCWMSSESLLSNIVYLRLYSCKHCTQLPALGKLRSLESM 5
           + FP WM + S+L  +V + LY CK+C QLP  GKL  L ++
Sbjct: 741 THFPHWMRNTSILKGLVSIILYDCKNCRQLPPFGKLPCLSTL 782


>ref|XP_002513098.1| Disease resistance protein RGA2, putative [Ricinus communis]
           gi|223548109|gb|EEF49601.1| Disease resistance protein
           RGA2, putative [Ricinus communis]
          Length = 1177

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 45/102 (44%), Positives = 62/102 (60%)
 Frame = -1

Query: 310 NMNEAKRAELQRKKNLHFLELDFGYFDDATKDDIQRMEGVIQALQPHTELEQLVIKGYPG 131
           ++ +A +A L+ KK L  LEL +    DA  DD  +  GV+  LQPHT L+ L I GY G
Sbjct: 703 DVQDASKANLKAKKQLKKLELRW----DAETDDTLQDLGVLLLLQPHTNLKCLSIVGYGG 758

Query: 130 SMFPCWMSSESLLSNIVYLRLYSCKHCTQLPALGKLRSLESM 5
           + FP W+   S  +NIV L L  CK+C+ LP LG+L SL+ +
Sbjct: 759 TRFPNWVGDPS-FANIVILTLRRCKYCSVLPPLGRLESLKEL 799


>ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|222834470|gb|EEE72947.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 43/104 (41%), Positives = 62/104 (59%)
 Frame = -1

Query: 313 ENMNEAKRAELQRKKNLHFLELDFGYFDDATKDDIQRMEGVIQALQPHTELEQLVIKGYP 134
           + + +A+ A L RK NL  L L +   DD++K      E V+ AL+PH+ +++L I GY 
Sbjct: 74  QGLTDAQNANLMRKTNLQSLSLSWRE-DDSSKISEANSEDVLCALEPHSNMKKLEISGYR 132

Query: 133 GSMFPCWMSSESLLSNIVYLRLYSCKHCTQLPALGKLRSLESME 2
           GS FP WM  E  L N+V + L SC +C  LP  GKLR L+ ++
Sbjct: 133 GSKFPDWM-MELRLPNLVEISLESCMNCEHLPPFGKLRFLKHLQ 175


Top