BLASTX nr result

ID: Coptis21_contig00039037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039037
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320107.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 ...   158   5e-37
ref|XP_003570446.1| PREDICTED: methionine adenosyltransferase 2 ...   155   2e-36
ref|XP_002453079.1| hypothetical protein SORBIDRAFT_04g037940 [S...   155   2e-36
ref|NP_001048585.1| Os02g0826200 [Oryza sativa Japonica Group] g...   155   4e-36

>ref|XP_002320107.1| predicted protein [Populus trichocarpa] gi|222860880|gb|EEE98422.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/100 (79%), Positives = 87/100 (87%), Gaps = 1/100 (1%)
 Frame = -3

Query: 299 VIVNCAAQSVPRVCEMDPTTAMATNVPCSLVKWLASFQE-PALLIHLSTDQVYEGLKSFY 123
           V+VNCAA SVPRVCE DP  AM+ NVPCSLV WL+SF+E   LLIHLSTDQVYEG+KSFY
Sbjct: 80  VVVNCAALSVPRVCEKDPDAAMSINVPCSLVNWLSSFEERDTLLIHLSTDQVYEGVKSFY 139

Query: 122 KEDDETVPVNVYGKSKVAAEQFISSNCTNFAILRSSIIYG 3
           KE+DETVPVNVYGKSKVAAEQFIS    N+AILRSSII+G
Sbjct: 140 KEEDETVPVNVYGKSKVAAEQFISKTWPNYAILRSSIIFG 179


>ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
           [Vitis vinifera] gi|297745208|emb|CBI40288.3| unnamed
           protein product [Vitis vinifera]
          Length = 318

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/100 (80%), Positives = 88/100 (88%), Gaps = 1/100 (1%)
 Frame = -3

Query: 299 VIVNCAAQSVPRVCEMDPTTAMATNVPCSLVKWLASFQEP-ALLIHLSTDQVYEGLKSFY 123
           V+VNCAA SVPR CEMDP  AM+ NVP SLVKWL SF+E   LLIHLSTDQVYEG+KSFY
Sbjct: 77  VVVNCAAISVPRSCEMDPAAAMSINVPSSLVKWLLSFEESNTLLIHLSTDQVYEGVKSFY 136

Query: 122 KEDDETVPVNVYGKSKVAAEQFISSNCTNFAILRSSIIYG 3
           KE+DETVPVNVYGKSKVAAEQFIS+N +N+AILRSSII G
Sbjct: 137 KEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIG 176


>ref|XP_003570446.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
           [Brachypodium distachyon]
          Length = 326

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/100 (76%), Positives = 86/100 (86%), Gaps = 1/100 (1%)
 Frame = -3

Query: 299 VIVNCAAQSVPRVCEMDPTTAMATNVPCSLVKWLASF-QEPALLIHLSTDQVYEGLKSFY 123
           VIVNCAA SVPR CEMDP  AMATN+P SLV W  SF    +LLIHLSTDQVYEG+KSFY
Sbjct: 85  VIVNCAAISVPRACEMDPAAAMATNIPSSLVNWSLSFGNSKSLLIHLSTDQVYEGVKSFY 144

Query: 122 KEDDETVPVNVYGKSKVAAEQFISSNCTNFAILRSSIIYG 3
           KE+DET+PVN+YGKSKVA+E+FI+ NC N+AILRSSIIYG
Sbjct: 145 KEEDETLPVNMYGKSKVASEKFITENCPNYAILRSSIIYG 184


>ref|XP_002453079.1| hypothetical protein SORBIDRAFT_04g037940 [Sorghum bicolor]
           gi|241932910|gb|EES06055.1| hypothetical protein
           SORBIDRAFT_04g037940 [Sorghum bicolor]
          Length = 325

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/100 (77%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
 Frame = -3

Query: 299 VIVNCAAQSVPRVCEMDPTTAMATNVPCSLVKWLASF-QEPALLIHLSTDQVYEGLKSFY 123
           V+VNCAA SVPR CEMDP  AMATNVP SLV WL SF  E +LLIHLSTDQVYEG+KSFY
Sbjct: 84  VVVNCAAMSVPRACEMDPPAAMATNVPSSLVNWLLSFGNEDSLLIHLSTDQVYEGVKSFY 143

Query: 122 KEDDETVPVNVYGKSKVAAEQFISSNCTNFAILRSSIIYG 3
           KE+DET PVN+YGKSKVAAE+ I   C+N+AILRSSIIYG
Sbjct: 144 KEEDETKPVNMYGKSKVAAEKLIVERCSNYAILRSSIIYG 183


>ref|NP_001048585.1| Os02g0826200 [Oryza sativa Japonica Group]
           gi|48716437|dbj|BAD23044.1| putative
           dTDP-4-dehydrorhamnose reductase [Oryza sativa Japonica
           Group] gi|113538116|dbj|BAF10499.1| Os02g0826200 [Oryza
           sativa Japonica Group] gi|215697942|dbj|BAG92141.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 317

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/100 (78%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
 Frame = -3

Query: 299 VIVNCAAQSVPRVCEMDPTTAMATNVPCSLVKWLASF-QEPALLIHLSTDQVYEGLKSFY 123
           VIVNCAA SVPR CE DP  AMATNVP SLV WL SF  +  LLIHLSTDQVYEG+KSFY
Sbjct: 76  VIVNCAAISVPRQCETDPAAAMATNVPSSLVTWLLSFGNDNTLLIHLSTDQVYEGVKSFY 135

Query: 122 KEDDETVPVNVYGKSKVAAEQFISSNCTNFAILRSSIIYG 3
           KEDDET+PVN+YGKSKVAAE+FI   C+N+AILRSSIIYG
Sbjct: 136 KEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYG 175


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