BLASTX nr result

ID: Coptis21_contig00039029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039029
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284256.1| PREDICTED: putative oxygen evolving enhancer...   160   8e-38
ref|XP_004149814.1| PREDICTED: psbP-like protein 1, chloroplasti...   156   2e-36
ref|XP_002315246.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
ref|XP_002531973.1| Thylakoid lumenal 25.6 kDa protein, chloropl...   154   9e-36
ref|XP_003552675.1| PREDICTED: uncharacterized protein LOC100305...   150   1e-34

>ref|XP_002284256.1| PREDICTED: putative oxygen evolving enhancer protein [Vitis
           vinifera] gi|296086290|emb|CBI31731.3| unnamed protein
           product [Vitis vinifera]
          Length = 238

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/90 (83%), Positives = 85/90 (94%)
 Frame = -3

Query: 271 GFQAISDKKDGYEFIYPFGWQEVVIEGQDKVFKDVIEPLETVSVNLVPTSKEDIRDLGSP 92
           GF A+ DKKDGY F+YPFGWQEVVI+GQDKVFKDVIEPLE+VSVN++PT K+DIR+LGSP
Sbjct: 87  GFLAVMDKKDGYSFLYPFGWQEVVIDGQDKVFKDVIEPLESVSVNMIPTVKQDIRELGSP 146

Query: 91  QEVAEALIKKVLAPPSQKTKLLEAKEHDID 2
           QEVAEALIKKVLAPPSQKTKL+EA EHD+D
Sbjct: 147 QEVAEALIKKVLAPPSQKTKLVEAVEHDVD 176


>ref|XP_004149814.1| PREDICTED: psbP-like protein 1, chloroplastic-like [Cucumis
           sativus] gi|449519084|ref|XP_004166565.1| PREDICTED:
           psbP-like protein 1, chloroplastic-like [Cucumis
           sativus]
          Length = 236

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/90 (80%), Positives = 82/90 (91%)
 Frame = -3

Query: 271 GFQAISDKKDGYEFIYPFGWQEVVIEGQDKVFKDVIEPLETVSVNLVPTSKEDIRDLGSP 92
           GF ++SDKKDGY F+YPFGWQEVVI+GQDKVFKDVIEPLE VSVNL+PTSKEDIRD G P
Sbjct: 85  GFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLENVSVNLIPTSKEDIRDFGPP 144

Query: 91  QEVAEALIKKVLAPPSQKTKLLEAKEHDID 2
           Q+VAE LIKKVLAP +QKTKL+EA EHD++
Sbjct: 145 QQVAETLIKKVLAPSNQKTKLIEASEHDVN 174


>ref|XP_002315246.1| predicted protein [Populus trichocarpa] gi|222864286|gb|EEF01417.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/90 (78%), Positives = 81/90 (90%)
 Frame = -3

Query: 271 GFQAISDKKDGYEFIYPFGWQEVVIEGQDKVFKDVIEPLETVSVNLVPTSKEDIRDLGSP 92
           GF  ++DKKDGY F+YPFGWQEVVIEGQDKVFKDVIEPLE++SVN++PT K+DIRD G P
Sbjct: 92  GFLLVTDKKDGYSFLYPFGWQEVVIEGQDKVFKDVIEPLESISVNVIPTVKQDIRDFGPP 151

Query: 91  QEVAEALIKKVLAPPSQKTKLLEAKEHDID 2
           Q+VAE LIKKVLAPPSQKTKL+EAKEH  D
Sbjct: 152 QQVAETLIKKVLAPPSQKTKLIEAKEHGAD 181


>ref|XP_002531973.1| Thylakoid lumenal 25.6 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223528370|gb|EEF30409.1| Thylakoid
           lumenal 25.6 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 242

 Score =  154 bits (388), Expect = 9e-36
 Identities = 71/90 (78%), Positives = 79/90 (87%)
 Frame = -3

Query: 271 GFQAISDKKDGYEFIYPFGWQEVVIEGQDKVFKDVIEPLETVSVNLVPTSKEDIRDLGSP 92
           GF  ++DKKDGY F+YPFGWQEV IEGQDKVFKD+IEPLE VSV  VPTSK+DIRD G P
Sbjct: 91  GFLLVTDKKDGYSFLYPFGWQEVFIEGQDKVFKDIIEPLENVSVTTVPTSKQDIRDFGPP 150

Query: 91  QEVAEALIKKVLAPPSQKTKLLEAKEHDID 2
           Q+VAE LIKKVLAPPSQKTKL+EA EHD+D
Sbjct: 151 QQVAEVLIKKVLAPPSQKTKLIEASEHDVD 180


>ref|XP_003552675.1| PREDICTED: uncharacterized protein LOC100305918 [Glycine max]
          Length = 236

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/90 (76%), Positives = 80/90 (88%)
 Frame = -3

Query: 271 GFQAISDKKDGYEFIYPFGWQEVVIEGQDKVFKDVIEPLETVSVNLVPTSKEDIRDLGSP 92
           GF  + DKKDGY F+YPFGWQEVVIEGQDKVFKDVIEPLE VSVN++PT K+DI + GSP
Sbjct: 85  GFLPVLDKKDGYSFLYPFGWQEVVIEGQDKVFKDVIEPLENVSVNVIPTGKQDITEFGSP 144

Query: 91  QEVAEALIKKVLAPPSQKTKLLEAKEHDID 2
           QEVAE LIKKVLAPP+QKTK++EAKE D++
Sbjct: 145 QEVAETLIKKVLAPPNQKTKIVEAKEQDVE 174


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