BLASTX nr result

ID: Coptis21_contig00039013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00039013
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_002518340.1| conserved hypothetical protein [Ricinus comm...    58   7e-07

>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
           gi|223527710|gb|EEF29816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 690

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
 Frame = -1

Query: 399 NGTIYAFT-ASNNVLATIDREGCGTMSIRWFQIESPRHYS--EAHFFWPYMVESYGEIYS 229
           NG +Y F+  +N+ +  +D    G + +R   +E     S  E+  F    VE+ GEIY 
Sbjct: 163 NGKLYVFSYLTNSAIFVLDEINKGGVVLRSLNVEYQNIMSQLESLNFRRCFVEASGEIYG 222

Query: 228 VFLHHIGEHDPLKYVEIFKMDFTKMAWVTVESLGETVFFLSQYGNMSLSVANSGIKGNTI 49
           + +   G    +  +E+ K+DF++MAW  VE + ++V FL  + ++S       I+GN +
Sbjct: 223 INILLGGYDSRVVDIEVRKIDFSRMAWEKVECVKDSVLFLDDHYSISCPEIRPEIQGNRL 282

Query: 48  HFVEK-NSLYVFGVGD 4
           +FV K + LY + + D
Sbjct: 283 YFVLKDHKLYSYSIED 298


>ref|XP_002518340.1| conserved hypothetical protein [Ricinus communis]
           gi|223542560|gb|EEF44100.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/76 (36%), Positives = 45/76 (59%)
 Frame = -1

Query: 270 FWPYMVESYGEIYSVFLHHIGEHDPLKYVEIFKMDFTKMAWVTVESLGETVFFLSQYGNM 91
           F  ++VES G +  VFL      + + YVE+++++  K+AW+  ESLGE   FL     M
Sbjct: 265 FKEFLVESEGMVLLVFLISRNSINTVDYVEVYQLNTAKLAWIKKESLGERTLFLGSNCCM 324

Query: 90  SLSVANSGIKGNTIHF 43
           S+S +  G +GN ++F
Sbjct: 325 SVSASRVGCRGNCVYF 340