BLASTX nr result

ID: Coptis21_contig00038964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038964
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331406.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002310352.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002330454.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002331406.1| predicted protein [Populus trichocarpa] gi|222873620|gb|EEF10751.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = +2

Query: 11  PVRAPLQPFMASNRPHMPWSLALLIVLVCVVSASGASEIDILMKFKKALVGAEVPLRDWN 190
           PVR PL   + ++     + L  L+V +  V++ G ++ +IL+KFK +L  A V L DW+
Sbjct: 8   PVRVPLLYSIVTSNHKTSFVLVFLLVSLHFVASLGLTDSEILLKFKGSLTNASV-LSDWS 66

Query: 191 PSVVPCT-NTTSNWGTTVICRDSTVYGLQLESM 286
               PCT N  +NW   VIC + +++GLQLE+M
Sbjct: 67  DKTTPCTKNNATNW-VGVICVEGSLWGLQLENM 98


>ref|XP_002310352.1| predicted protein [Populus trichocarpa] gi|222853255|gb|EEE90802.1|
           predicted protein [Populus trichocarpa]
          Length = 625

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/72 (44%), Positives = 44/72 (61%)
 Frame = +2

Query: 71  LALLIVLVCVVSASGASEIDILMKFKKALVGAEVPLRDWNPSVVPCTNTTSNWGTTVICR 250
           L L  VL  VV++ G+ + D L+KFK+ LV  E  + +WN SV PC    SNW   V+C 
Sbjct: 19  LVLAFVLSIVVTSFGSPDSDALLKFKEQLVNNE-GISNWNVSVNPCERDRSNW-VGVLCF 76

Query: 251 DSTVYGLQLESM 286
           +  ++GLQLE M
Sbjct: 77  NGGIWGLQLEHM 88


>ref|XP_002330454.1| predicted protein [Populus trichocarpa] gi|222871866|gb|EEF08997.1|
           predicted protein [Populus trichocarpa]
          Length = 653

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/72 (43%), Positives = 41/72 (56%)
 Frame = +2

Query: 71  LALLIVLVCVVSASGASEIDILMKFKKALVGAEVPLRDWNPSVVPCTNTTSNWGTTVICR 250
           L L  VL  VV++ G+ + D L+KFK  L      +  WNPSV PC    SNW   V+C 
Sbjct: 20  LVLAFVLSIVVTSFGSPDSDALLKFKDQLANNGA-INSWNPSVKPCEWERSNW-VGVLCL 77

Query: 251 DSTVYGLQLESM 286
           + ++ GLQLE M
Sbjct: 78  NGSIRGLQLEHM 89


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