BLASTX nr result

ID: Coptis21_contig00038957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038957
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38416.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus commun...    75   7e-12
gb|AAG51472.1|AC069471_3 hypothetical protein [Arabidopsis thali...    68   7e-10
ref|NP_973924.1| tRNA nucleotidyltransferase (CCA-adding enzyme)...    68   7e-10
ref|NP_174130.2| tRNA nucleotidyltransferase (CCA-adding enzyme)...    68   7e-10

>emb|CBI38416.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/63 (57%), Positives = 43/63 (68%)
 Frame = -1

Query: 190 QVSSFXXXXXXXXXXXXVFPSQRPSGCNKEDFVRWKDCLRRDFTINSLFYDPSANKIYDY 11
           +VSSF            V  SQ PSGC++ DF RW++C+ RDFTINSLF+DP  NKIYDY
Sbjct: 94  EVSSFETVAKHGEEKEKVSFSQMPSGCDESDFNRWRNCMHRDFTINSLFFDPFVNKIYDY 153

Query: 10  ANG 2
           ANG
Sbjct: 154 ANG 156


>ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 675

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/63 (53%), Positives = 43/63 (68%)
 Frame = -1

Query: 190 QVSSFXXXXXXXXXXXXVFPSQRPSGCNKEDFVRWKDCLRRDFTINSLFYDPSANKIYDY 11
           +VSSF            V  SQ+PSGCN  DF+RW++ + RDFTINSLF+DP  N+I+DY
Sbjct: 146 EVSSFETVAQHNEGKEEVLISQKPSGCNGRDFIRWRNSMHRDFTINSLFFDPFMNQIFDY 205

Query: 10  ANG 2
           ANG
Sbjct: 206 ANG 208


>gb|AAG51472.1|AC069471_3 hypothetical protein [Arabidopsis thaliana]
          Length = 462

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 24/42 (57%), Positives = 35/42 (83%)
 Frame = -1

Query: 127 QRPSGCNKEDFVRWKDCLRRDFTINSLFYDPSANKIYDYANG 2
           +RP+GC++ D++RWK+CL+RDFT+N L +DPS N +YDY  G
Sbjct: 149 RRPAGCDERDYIRWKNCLQRDFTVNGLMFDPSENVVYDYIGG 190


>ref|NP_973924.1| tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis
           thaliana] gi|194272240|gb|ACF37205.1| At1g28090
           [Arabidopsis thaliana] gi|222424128|dbj|BAH20023.1|
           AT1G28090 [Arabidopsis thaliana]
           gi|332192790|gb|AEE30911.1| tRNA nucleotidyltransferase
           (CCA-adding enzyme) [Arabidopsis thaliana]
          Length = 505

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 24/42 (57%), Positives = 35/42 (83%)
 Frame = -1

Query: 127 QRPSGCNKEDFVRWKDCLRRDFTINSLFYDPSANKIYDYANG 2
           +RP+GC++ D++RWK+CL+RDFT+N L +DPS N +YDY  G
Sbjct: 155 RRPAGCDERDYIRWKNCLQRDFTVNGLMFDPSENVVYDYIGG 196


>ref|NP_174130.2| tRNA nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis
           thaliana] gi|332192789|gb|AEE30910.1| tRNA
           nucleotidyltransferase (CCA-adding enzyme) [Arabidopsis
           thaliana]
          Length = 541

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 24/42 (57%), Positives = 35/42 (83%)
 Frame = -1

Query: 127 QRPSGCNKEDFVRWKDCLRRDFTINSLFYDPSANKIYDYANG 2
           +RP+GC++ D++RWK+CL+RDFT+N L +DPS N +YDY  G
Sbjct: 191 RRPAGCDERDYIRWKNCLQRDFTVNGLMFDPSENVVYDYIGG 232


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