BLASTX nr result

ID: Coptis21_contig00038954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038954
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142831.1| PREDICTED: transcription factor ABORTED MICR...   100   1e-19
ref|XP_004156739.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    98   6e-19
ref|XP_002985518.1| hypothetical protein SELMODRAFT_451590 [Sela...    98   6e-19
ref|XP_002991957.1| hypothetical protein SELMODRAFT_430203 [Sela...    98   6e-19
ref|XP_003555214.1| PREDICTED: transcription factor ABORTED MICR...    92   3e-17

>ref|XP_004142831.1| PREDICTED: transcription factor ABORTED MICROSPORES-like [Cucumis
           sativus]
          Length = 623

 Score =  100 bits (249), Expect = 1e-19
 Identities = 57/100 (57%), Positives = 71/100 (71%), Gaps = 5/100 (5%)
 Frame = +2

Query: 14  LHQSVMGTNTSLHPFADSGAT--KQPGAEKDSVKQENGRTDSVSDCSDQNEDDDQ---KT 178
           +H S+M T+ +   F ++     +Q   EKD VK ENGR+DS+SDCSD+ ED+D    K 
Sbjct: 299 IHGSIMNTSNTHGQFKENMMEYKEQQREEKDLVKHENGRSDSISDCSDRLEDEDDAIAKY 358

Query: 179 IGRGGKRHQSKNLVAERKRRKKLNDKLYALRALVPKISKM 298
             R G+  QSKNLVAERKRRKKLN++LY LRALVPKISKM
Sbjct: 359 RRRTGQGPQSKNLVAERKRRKKLNERLYNLRALVPKISKM 398


>ref|XP_004156739.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor ABORTED
           MICROSPORES-like [Cucumis sativus]
          Length = 516

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
 Frame = +2

Query: 14  LHQSVMGTNTSLHPFADSGAT--KQPGAEKDSVKQENGRTDSVSDCSDQNEDDDQ---KT 178
           +H S+M T+ +   F ++     +Q   EKD VK ENGR+DS+SDCSD+ ED+D    K 
Sbjct: 192 IHGSIMNTSNTHGQFKENMMEYKEQQREEKDLVKHENGRSDSISDCSDRLEDEDDAIAKY 251

Query: 179 IGRGGKRHQSKNLVAERKRRKKLNDKLYALRALVPKISKM 298
             R G+  QSKNLVAERKRRK LN++LY LRALVPKISKM
Sbjct: 252 RRRTGQGPQSKNLVAERKRRKXLNERLYNLRALVPKISKM 291


>ref|XP_002985518.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
           gi|300146724|gb|EFJ13392.1| hypothetical protein
           SELMODRAFT_451590 [Selaginella moellendorffii]
          Length = 551

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 52/83 (62%), Positives = 62/83 (74%)
 Frame = +2

Query: 50  HPFADSGATKQPGAEKDSVKQENGRTDSVSDCSDQNEDDDQKTIGRGGKRHQSKNLVAER 229
           H F++S        E   VKQE  R DS SDCSDQ ++DD+K  GR G+RH SKNLVAER
Sbjct: 284 HSFSESPHGSGVSKENSEVKQET-RADS-SDCSDQVDEDDEKATGRSGRRHLSKNLVAER 341

Query: 230 KRRKKLNDKLYALRALVPKISKM 298
           KRRKKLN++LY+LRALVPKI+KM
Sbjct: 342 KRRKKLNERLYSLRALVPKITKM 364


>ref|XP_002991957.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
           gi|300140199|gb|EFJ06925.1| hypothetical protein
           SELMODRAFT_430203 [Selaginella moellendorffii]
          Length = 551

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 52/83 (62%), Positives = 62/83 (74%)
 Frame = +2

Query: 50  HPFADSGATKQPGAEKDSVKQENGRTDSVSDCSDQNEDDDQKTIGRGGKRHQSKNLVAER 229
           H F++S        E   VKQE  R DS SDCSDQ ++DD+K  GR G+RH SKNLVAER
Sbjct: 284 HSFSESPHGSGVSKENSEVKQET-RADS-SDCSDQVDEDDEKATGRSGRRHLSKNLVAER 341

Query: 230 KRRKKLNDKLYALRALVPKISKM 298
           KRRKKLN++LY+LRALVPKI+KM
Sbjct: 342 KRRKKLNERLYSLRALVPKITKM 364


>ref|XP_003555214.1| PREDICTED: transcription factor ABORTED MICROSPORES-like [Glycine
           max]
          Length = 529

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 51/95 (53%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
 Frame = +2

Query: 17  HQSVMGTNTSLHPFADSGATKQPGAEKDSVKQENGRTDSVSDCSDQNEDD-DQKTIGRGG 193
           +Q  + T T         A ++   +KD +K   GR+DS+SDCSDQNE++ D K   R G
Sbjct: 229 YQKSLMTTTDSQYVEPLEAKEKQEEDKDLLKNVVGRSDSMSDCSDQNEEEEDGKYRRRNG 288

Query: 194 KRHQSKNLVAERKRRKKLNDKLYALRALVPKISKM 298
           K +QSKNLVAERKRRKKLND+LY LR+LVP+ISK+
Sbjct: 289 KGNQSKNLVAERKRRKKLNDRLYNLRSLVPRISKL 323


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