BLASTX nr result

ID: Coptis21_contig00038952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038952
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38427.3| unnamed protein product [Vitis vinifera]              190   1e-46
ref|XP_002532882.1| conserved hypothetical protein [Ricinus comm...   179   3e-43
ref|XP_002309973.1| predicted protein [Populus trichocarpa] gi|2...   177   8e-43
gb|ABR18048.1| unknown [Picea sitchensis]                             142   3e-32
ref|XP_003517759.1| PREDICTED: uncharacterized protein LOC100788...   112   4e-23

>emb|CBI38427.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  190 bits (483), Expect = 1e-46
 Identities = 88/151 (58%), Positives = 111/151 (73%), Gaps = 1/151 (0%)
 Frame = -3

Query: 543 SLTVKGTP-ICDDTVNSHLCGLIHTCPAMVSLGLSIFAPTNTCCVYSPANLNTMGDLDLK 367
           SLT K +P ICD ++ SHLC  I+TCP++VSLGL +F PTN+CCVYSPAN NT G+LDL 
Sbjct: 132 SLTSKASPPICDPSL-SHLCASIYTCPSVVSLGLPLFPPTNSCCVYSPANFNTKGELDLH 190

Query: 366 SLKCASYVSVVSLGDVPTDPSSWVYGITLKYNQVGVDNNNIATRCEACRKSDGICGYAPP 187
           +LKCA+Y SVV+LGD PTDP+ W YG+  KY Q   DN  + T+C AC  S G+CGYAPP
Sbjct: 191 ALKCAAYASVVTLGDYPTDPTRWEYGVVFKYTQGKFDNYGMDTKCYACDSSGGVCGYAPP 250

Query: 186 RNNFLCVCKSGVNSSTDCYNQLPAPFWSSNS 94
            N+F+CVC +G N+S++C     A  WSS S
Sbjct: 251 SNSFVCVCGNGFNTSSNCNGYSFAGIWSSGS 281


>ref|XP_002532882.1| conserved hypothetical protein [Ricinus communis]
           gi|223527367|gb|EEF29511.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  179 bits (454), Expect = 3e-43
 Identities = 80/161 (49%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
 Frame = -3

Query: 552 PTSSLTVKGTPICDDTVNSHLCGLIHTCPAMVSLGLSIFAPTNTCCVYSPANLNTMGDLD 373
           PTSSLT+KG+P+CD + +S+LC  I+TCP+++ LGL +F PTNTCCVY+PAN N   +LD
Sbjct: 129 PTSSLTMKGSPVCDAS-SSYLCASIYTCPSVIGLGLPLFPPTNTCCVYAPANFNGKSELD 187

Query: 372 LKSLKCASYVSVVSLGDVPTDPSSWVYGITLKYNQVGVDNNNIATRCEACRKSDGICGYA 193
           L  LKC+ Y S++SL D PTDP+ W YG+ L Y     D+  + T+C  C  S G+CGYA
Sbjct: 188 LHMLKCSGYASIISLQDYPTDPTRWEYGVVLNYRSGAFDDFYMDTKCNTCESSGGVCGYA 247

Query: 192 PPRNNFLCVCKSGVNSSTDC--YNQ---LPAPFWSSNSFRV 85
            P  +FLC+C SG+N++TDC  Y+Q    P+   S++S+++
Sbjct: 248 APGYSFLCLCNSGINTTTDCNAYSQDVVFPSSSVSTSSWKM 288


>ref|XP_002309973.1| predicted protein [Populus trichocarpa] gi|222852876|gb|EEE90423.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  177 bits (450), Expect = 8e-43
 Identities = 77/140 (55%), Positives = 101/140 (72%)
 Frame = -3

Query: 552 PTSSLTVKGTPICDDTVNSHLCGLIHTCPAMVSLGLSIFAPTNTCCVYSPANLNTMGDLD 373
           PTSSL +KG+P+CD   +S+LC  I+TCP+++ LGL +F PTNTCCVYSPAN N+ G+LD
Sbjct: 133 PTSSLNIKGSPVCD--TSSYLCASIYTCPSVIGLGLPLFPPTNTCCVYSPANFNSKGELD 190

Query: 372 LKSLKCASYVSVVSLGDVPTDPSSWVYGITLKYNQVGVDNNNIATRCEACRKSDGICGYA 193
           L+ LKC  Y SVVSL + PTDPS W YG+ LK     +D+  I  +C  C  S G+CGYA
Sbjct: 191 LQKLKCMGYASVVSLQEHPTDPSQWQYGVELKSRGGALDDYYIDNKCNTCEISGGVCGYA 250

Query: 192 PPRNNFLCVCKSGVNSSTDC 133
           PP N+F+CVC   +N++ DC
Sbjct: 251 PPVNSFVCVCSDTINTTMDC 270


>gb|ABR18048.1| unknown [Picea sitchensis]
          Length = 323

 Score =  142 bits (359), Expect = 3e-32
 Identities = 64/148 (43%), Positives = 95/148 (64%)
 Frame = -3

Query: 546 SSLTVKGTPICDDTVNSHLCGLIHTCPAMVSLGLSIFAPTNTCCVYSPANLNTMGDLDLK 367
           SS     T    DT +S +C  ++TCP ++ LGL  ++P +TCCVY+P NL +  +++L 
Sbjct: 152 SSCLYSPTNYLCDTGSSQICSSLYTCPGVLGLGLQQYSPISTCCVYAPINLGSAAEINLA 211

Query: 366 SLKCASYVSVVSLGDVPTDPSSWVYGITLKYNQVGVDNNNIATRCEACRKSDGICGYAPP 187
            L+C SY S+ S GD  TDP+ W YGI LKY+   +DN+N  T C +C +S G+CG+   
Sbjct: 212 KLQCQSYTSIYSFGDDATDPTRWNYGIALKYS-FNLDNSNFPTACVSCEQSKGVCGFTGM 270

Query: 186 RNNFLCVCKSGVNSSTDCYNQLPAPFWS 103
            N+F CVC++GVN++T+C  Q    +WS
Sbjct: 271 YNSFTCVCRNGVNTTTNCNGQ--EYYWS 296


>ref|XP_003517759.1| PREDICTED: uncharacterized protein LOC100788392 [Glycine max]
          Length = 294

 Score =  112 bits (280), Expect = 4e-23
 Identities = 51/130 (39%), Positives = 79/130 (60%)
 Frame = -3

Query: 519 ICDDTVNSHLCGLIHTCPAMVSLGLSIFAPTNTCCVYSPANLNTMGDLDLKSLKCASYVS 340
           +CD    + +C L+++C  + ++ L    P +TCCVY+P NL    ++DL+ L+C SY  
Sbjct: 144 LCDQ--GTPICSLLYSCRPISTINL----PISTCCVYTPVNLGPAFEMDLQKLQCPSYTG 197

Query: 339 VVSLGDVPTDPSSWVYGITLKYNQVGVDNNNIATRCEACRKSDGICGYAPPRNNFLCVCK 160
             +  D  TDP  W YGI LKY +  V  N+    C+AC +S G+CGY    N+F+C C 
Sbjct: 198 FYNFNDQQTDPEKWNYGIALKY-KFSV-TNDYPGSCDACERSHGVCGYGGAYNSFVCNCP 255

Query: 159 SGVNSSTDCY 130
           +G+N++TDC+
Sbjct: 256 NGINTTTDCF 265