BLASTX nr result

ID: Coptis21_contig00038945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038945
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39722.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002264726.1| PREDICTED: calcium-activated outward-rectify...   132   3e-29
emb|CAN63183.1| hypothetical protein VITISV_029267 [Vitis vinifera]   130   1e-28
emb|CAA73483.1| putative outward rectifying potassium channel St...   129   3e-28
ref|XP_002266068.1| PREDICTED: calcium-activated outward-rectify...   127   9e-28

>emb|CBI39722.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/77 (80%), Positives = 70/77 (90%)
 Frame = -2

Query: 232 LGVGTLCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLVPNSIATKLLACAFVFTG 53
           LGVGT+CFYL + Q+KGKKTNG +DA Y CIVTMTTVGYGD+VP+S+ATKLLACAFVFTG
Sbjct: 45  LGVGTVCFYLTRHQMKGKKTNGVVDAVYFCIVTMTTVGYGDIVPDSVATKLLACAFVFTG 104

Query: 52  MALVGLVLSKAADYLVE 2
           MAL+ L LSKAADYLVE
Sbjct: 105 MALIALCLSKAADYLVE 121


>ref|XP_002264726.1| PREDICTED: calcium-activated outward-rectifying potassium channel 1
           [Vitis vinifera]
          Length = 354

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/77 (80%), Positives = 70/77 (90%)
 Frame = -2

Query: 232 LGVGTLCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLVPNSIATKLLACAFVFTG 53
           LGVGT+CFYL + Q+KGKKTNG +DA Y CIVTMTTVGYGD+VP+S+ATKLLACAFVFTG
Sbjct: 79  LGVGTVCFYLTRHQMKGKKTNGVVDAVYFCIVTMTTVGYGDIVPDSVATKLLACAFVFTG 138

Query: 52  MALVGLVLSKAADYLVE 2
           MAL+ L LSKAADYLVE
Sbjct: 139 MALIALCLSKAADYLVE 155


>emb|CAN63183.1| hypothetical protein VITISV_029267 [Vitis vinifera]
          Length = 354

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/77 (79%), Positives = 69/77 (89%)
 Frame = -2

Query: 232 LGVGTLCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLVPNSIATKLLACAFVFTG 53
           LGVGT+CFYL + Q+KGKKTNG +DA Y CIVTMTTVGYGD+VP+S+ATKLLACAFVFTG
Sbjct: 79  LGVGTVCFYLTRHQMKGKKTNGVVDAVYFCIVTMTTVGYGDIVPDSVATKLLACAFVFTG 138

Query: 52  MALVGLVLSKAADYLVE 2
           M L+ L LSKAADYLVE
Sbjct: 139 MVLIALSLSKAADYLVE 155


>emb|CAA73483.1| putative outward rectifying potassium channel StKCO1a [Solanum
           tuberosum]
          Length = 349

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/77 (77%), Positives = 68/77 (88%)
 Frame = -2

Query: 232 LGVGTLCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLVPNSIATKLLACAFVFTG 53
           LG+GT+CFY  +S+IKGKK +G LD+ Y C+VTMTTVGYGDLVPNS  TKLLAC FVF+G
Sbjct: 78  LGIGTICFYFVRSKIKGKKIDGVLDSLYFCVVTMTTVGYGDLVPNSATTKLLACVFVFSG 137

Query: 52  MALVGLVLSKAADYLVE 2
           MALVGLVLSKAADYLVE
Sbjct: 138 MALVGLVLSKAADYLVE 154


>ref|XP_002266068.1| PREDICTED: calcium-activated outward-rectifying potassium channel 1
           [Vitis vinifera] gi|296089902|emb|CBI39721.3| unnamed
           protein product [Vitis vinifera]
          Length = 358

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/77 (79%), Positives = 67/77 (87%)
 Frame = -2

Query: 232 LGVGTLCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLVPNSIATKLLACAFVFTG 53
           LG GTLCFYL +  +KGKKTNG LDA Y C+VTM+TVGYGDLVP+S ATKLLACAFVFTG
Sbjct: 78  LGAGTLCFYLARHWMKGKKTNGVLDAVYFCVVTMSTVGYGDLVPDSAATKLLACAFVFTG 137

Query: 52  MALVGLVLSKAADYLVE 2
           MAL+ L LSKAADYLVE
Sbjct: 138 MALIALSLSKAADYLVE 154


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