BLASTX nr result

ID: Coptis21_contig00038940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038940
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278006.1| PREDICTED: uncharacterized protein LOC100243...    90   2e-16
ref|XP_002313698.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002305530.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002327729.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_004169426.1| PREDICTED: uncharacterized LOC101207270, par...    72   6e-11

>ref|XP_002278006.1| PREDICTED: uncharacterized protein LOC100243514 [Vitis vinifera]
          Length = 720

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = +3

Query: 30  EQVCGYFYSAMPPPMLSPQRDFGWDFFNPFDGVRPEVIGGFTRNSDEDLRVVR 188
           EQVCGYFY  M P   SPQ++FGWDFFNPFDGVRPEVI G++R S++DLRVVR
Sbjct: 134 EQVCGYFYMQMSPSTPSPQKEFGWDFFNPFDGVRPEVISGYSRFSEDDLRVVR 186


>ref|XP_002313698.1| predicted protein [Populus trichocarpa] gi|222850106|gb|EEE87653.1|
           predicted protein [Populus trichocarpa]
          Length = 706

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = +3

Query: 33  QVCGYFYSAMPPPMLSPQRDFGWDFFNPFD-GVRPEVIGGFTRNSDEDLRVVR 188
           Q  GY+Y  MPPP  SPQRDFGWDFFNPF+   RPE+I G+ R+SD+DLR VR
Sbjct: 117 QSYGYYYMQMPPPPQSPQRDFGWDFFNPFNTSTRPEIISGYRRSSDDDLRAVR 169


>ref|XP_002305530.1| predicted protein [Populus trichocarpa] gi|222848494|gb|EEE86041.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = +3

Query: 30  EQVCGYFYSAMPPPMLSPQRDFGWDFFNPFD-GVRPEVIGGFTRNSDEDLRVVR 188
           +Q  GY+Y  MP P  SPQRDFGWDFFNPFD  +RPE++  +TR SD+DLR VR
Sbjct: 114 QQSFGYYYMQMPLPPQSPQRDFGWDFFNPFDTAMRPEIMSAYTRTSDDDLRFVR 167


>ref|XP_002327729.1| predicted protein [Populus trichocarpa] gi|222836814|gb|EEE75207.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = +3

Query: 30  EQVCGYFYSAMPPPMLSPQRDFGWDFFNPFDGVRPEVIGGFTRNSDEDLRVVR 188
           E VC +FY    P M S +R FGWDFFNPFD VR EV+ GF ++SDED R VR
Sbjct: 158 EAVCDHFYDEASPLMPSSERGFGWDFFNPFDEVRTEVVNGFRQSSDEDFRAVR 210


>ref|XP_004169426.1| PREDICTED: uncharacterized LOC101207270, partial [Cucumis sativus]
          Length = 515

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/54 (57%), Positives = 42/54 (77%)
 Frame = +3

Query: 27  VEQVCGYFYSAMPPPMLSPQRDFGWDFFNPFDGVRPEVIGGFTRNSDEDLRVVR 188
           +EQV  YFY  MPPPM SPQR+FGWDFFNPF+ +R +V+G +    +++LR+VR
Sbjct: 130 IEQVPPYFYMQMPPPMPSPQREFGWDFFNPFESMRTDVVGEY---REDELRMVR 180


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