BLASTX nr result

ID: Coptis21_contig00038908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038908
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513617.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
ref|XP_004149462.1| PREDICTED: WD repeat-containing protein 91 h...    60   1e-07
ref|XP_003555399.1| PREDICTED: WD repeat-containing protein 91 h...    59   4e-07
ref|XP_003535585.1| PREDICTED: WD repeat-containing protein 91-l...    59   4e-07
ref|XP_003535582.1| PREDICTED: WD repeat-containing protein 91 h...    59   4e-07

>ref|XP_002513617.1| conserved hypothetical protein [Ricinus communis]
           gi|223547525|gb|EEF49020.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 655

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +2

Query: 2   PHSAAITTVDWHPALPIFLTGSADNSVRVT 91
           PHSAA+TTVDWHP LPIFLTGSADNSVRV+
Sbjct: 623 PHSAAVTTVDWHPTLPIFLTGSADNSVRVS 652


>ref|XP_004149462.1| PREDICTED: WD repeat-containing protein 91 homolog [Cucumis
           sativus] gi|449523658|ref|XP_004168840.1| PREDICTED: WD
           repeat-containing protein 91 homolog [Cucumis sativus]
          Length = 343

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +2

Query: 2   PHSAAITTVDWHPALPIFLTGSADNSVRVT 91
           PH+AAITTVDWHP LP+FLTGSAD+S+RVT
Sbjct: 311 PHTAAITTVDWHPTLPVFLTGSADHSIRVT 340


>ref|XP_003555399.1| PREDICTED: WD repeat-containing protein 91 homolog [Glycine max]
          Length = 138

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +2

Query: 2   PHSAAITTVDWHPALPIFLTGSADNSVRVT 91
           PH A IT VDWHP LPIFLTGSADNSVRVT
Sbjct: 106 PHGAPITAVDWHPTLPIFLTGSADNSVRVT 135


>ref|XP_003535585.1| PREDICTED: WD repeat-containing protein 91-like [Glycine max]
          Length = 631

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +2

Query: 2   PHSAAITTVDWHPALPIFLTGSADNSVRVT 91
           PH A IT VDWHP LPIFLTGSADNSVRVT
Sbjct: 599 PHGAPITAVDWHPTLPIFLTGSADNSVRVT 628


>ref|XP_003535582.1| PREDICTED: WD repeat-containing protein 91 homolog [Glycine max]
          Length = 125

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +2

Query: 2   PHSAAITTVDWHPALPIFLTGSADNSVRVT 91
           PH A IT VDWHP LPIFLTGSADNSVRVT
Sbjct: 93  PHGAPITAVDWHPTLPIFLTGSADNSVRVT 122


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