BLASTX nr result

ID: Coptis21_contig00038903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038903
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836076.1| ATP synthase CF0 subunit I [Megaleranthis sa...   255   3e-66
gb|AAZ03832.1| ATP synthase CF0 B chain [Ranunculus macranthus]       254   5e-66
ref|YP_001004172.1| ATP synthase CF0 subunit I [Ranunculus macra...   254   5e-66
ref|YP_740551.1| ATP synthase CF0 subunit I [Platanus occidental...   251   4e-65
ref|YP_001294170.1| ATP synthase CF0 subunit I [Buxus microphyll...   250   7e-65

>ref|YP_002836076.1| ATP synthase CF0 subunit I [Megaleranthis saniculifolia]
           gi|226933868|gb|ACO92001.1| ATP synthase CF0 subunit I
           [Megaleranthis saniculifolia]
          Length = 184

 Score =  255 bits (651), Expect = 3e-66
 Identities = 131/136 (96%), Positives = 134/136 (98%)
 Frame = +1

Query: 7   LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVKMEADEFRVNGYSEIEREKV 186
           LSDLLDNRKQRILSTIRNSEELR GAIEKLEKAKARLRKV+MEADEFRVNGYSEIEREK 
Sbjct: 49  LSDLLDNRKQRILSTIRNSEELREGAIEKLEKAKARLRKVQMEADEFRVNGYSEIEREKF 108

Query: 187 NLINSTYQNLERLENYKNETIQFEQERAINQVRQRVFQQALQGALGTLNSCLNNELHLRT 366
           NLINSTYQNLERLENYKNETIQFEQ+RAINQVRQRVFQQAL+GALGTLNSCLNNELHLRT
Sbjct: 109 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRVFQQALEGALGTLNSCLNNELHLRT 168

Query: 367 ISANIGMFGAMKEITD 414
           ISANIGMFGAMKEITD
Sbjct: 169 ISANIGMFGAMKEITD 184


>gb|AAZ03832.1| ATP synthase CF0 B chain [Ranunculus macranthus]
          Length = 188

 Score =  254 bits (649), Expect = 5e-66
 Identities = 130/135 (96%), Positives = 132/135 (97%)
 Frame = +1

Query: 7   LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVKMEADEFRVNGYSEIEREKV 186
           LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVK EADEFR NGYSEIEREK 
Sbjct: 54  LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVKAEADEFRTNGYSEIEREKC 113

Query: 187 NLINSTYQNLERLENYKNETIQFEQERAINQVRQRVFQQALQGALGTLNSCLNNELHLRT 366
           NLINSTYQNLERLENYKNETIQFEQ+RAINQVRQR+FQQALQGALGTLNSCLNNELHLRT
Sbjct: 114 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRIFQQALQGALGTLNSCLNNELHLRT 173

Query: 367 ISANIGMFGAMKEIT 411
           ISANIGMFGAMKEIT
Sbjct: 174 ISANIGMFGAMKEIT 188


>ref|YP_001004172.1| ATP synthase CF0 subunit I [Ranunculus macranthus]
           gi|226694449|sp|A1XGM4.1|ATPF_RANMC RecName: Full=ATP
           synthase subunit b, chloroplastic; AltName: Full=ATP
           synthase F(0) sector subunit b; AltName: Full=ATPase
           subunit I gi|85540790|gb|ABC70742.1| ATP synthase CF0
           subunit I [Ranunculus macranthus]
          Length = 183

 Score =  254 bits (649), Expect = 5e-66
 Identities = 130/135 (96%), Positives = 132/135 (97%)
 Frame = +1

Query: 7   LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVKMEADEFRVNGYSEIEREKV 186
           LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVK EADEFR NGYSEIEREK 
Sbjct: 49  LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVKAEADEFRTNGYSEIEREKC 108

Query: 187 NLINSTYQNLERLENYKNETIQFEQERAINQVRQRVFQQALQGALGTLNSCLNNELHLRT 366
           NLINSTYQNLERLENYKNETIQFEQ+RAINQVRQR+FQQALQGALGTLNSCLNNELHLRT
Sbjct: 109 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRIFQQALQGALGTLNSCLNNELHLRT 168

Query: 367 ISANIGMFGAMKEIT 411
           ISANIGMFGAMKEIT
Sbjct: 169 ISANIGMFGAMKEIT 183


>ref|YP_740551.1| ATP synthase CF0 subunit I [Platanus occidentalis]
           gi|122166049|sp|Q09G60.1|ATPF_PLAOC RecName: Full=ATP
           synthase subunit b, chloroplastic; AltName: Full=ATP
           synthase F(0) sector subunit b; AltName: Full=ATPase
           subunit I gi|114054370|gb|ABI49764.1| ATP synthase CF0
           subunit I [Platanus occidentalis]
          Length = 184

 Score =  251 bits (641), Expect = 4e-65
 Identities = 128/136 (94%), Positives = 134/136 (98%)
 Frame = +1

Query: 7   LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVKMEADEFRVNGYSEIEREKV 186
           LSDLLDNRKQRILSTIRNSEELRGGAIE+LEKA+ARLRKV+MEADEFRVNGYSEIEREK+
Sbjct: 49  LSDLLDNRKQRILSTIRNSEELRGGAIEQLEKARARLRKVEMEADEFRVNGYSEIEREKL 108

Query: 187 NLINSTYQNLERLENYKNETIQFEQERAINQVRQRVFQQALQGALGTLNSCLNNELHLRT 366
           NLINSTY+NLERLENYKNETIQFEQ+RAINQVRQRVFQQALQ ALGTLNSCLNNELHLRT
Sbjct: 109 NLINSTYKNLERLENYKNETIQFEQQRAINQVRQRVFQQALQRALGTLNSCLNNELHLRT 168

Query: 367 ISANIGMFGAMKEITD 414
           ISANIGMFG MKEITD
Sbjct: 169 ISANIGMFGTMKEITD 184


>ref|YP_001294170.1| ATP synthase CF0 subunit I [Buxus microphylla]
           gi|226741352|sp|A6MM22.1|ATPF_BUXMI RecName: Full=ATP
           synthase subunit b, chloroplastic; AltName: Full=ATP
           synthase F(0) sector subunit b; AltName: Full=ATPase
           subunit I gi|146762271|gb|ABQ45235.1| ATP synthase CF0
           subunit I [Buxus microphylla]
          Length = 184

 Score =  250 bits (639), Expect = 7e-65
 Identities = 128/136 (94%), Positives = 134/136 (98%)
 Frame = +1

Query: 7   LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVKMEADEFRVNGYSEIEREKV 186
           LSDLLDNRKQRILSTIRNSEELR GAIE+LEKA+ARLRKV+MEADEFRVNGYSEIEREK+
Sbjct: 49  LSDLLDNRKQRILSTIRNSEELRVGAIEQLEKARARLRKVEMEADEFRVNGYSEIEREKL 108

Query: 187 NLINSTYQNLERLENYKNETIQFEQERAINQVRQRVFQQALQGALGTLNSCLNNELHLRT 366
           NLINSTY+NLERLENYKNETI FEQ+RAINQVRQRVFQQALQGALGTLNSCLNNELHLRT
Sbjct: 109 NLINSTYKNLERLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHLRT 168

Query: 367 ISANIGMFGAMKEITD 414
           ISANIGMFGAMKEITD
Sbjct: 169 ISANIGMFGAMKEITD 184


Top