BLASTX nr result

ID: Coptis21_contig00038899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038899
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21244.3| unnamed protein product [Vitis vinifera]               59   3e-07
emb|CAN71074.1| hypothetical protein VITISV_020460 [Vitis vinifera]    59   3e-07
ref|XP_002275362.2| PREDICTED: protein FAR1-RELATED SEQUENCE 12-...    58   9e-07

>emb|CBI21244.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/53 (49%), Positives = 33/53 (62%)
 Frame = +1

Query: 25  PKISQKF*SLDKAYEFYNNYAKVVGFSIRSNSTEKDKEGNETIMKEYRCFKEG 183
           PK+  +F S D AY FYN YAKVVGFS+R +   K K     + + + CFKEG
Sbjct: 81  PKVGMEFESEDDAYVFYNRYAKVVGFSVRKDFLNKSKVNGTVVSRRFTCFKEG 133


>emb|CAN71074.1| hypothetical protein VITISV_020460 [Vitis vinifera]
          Length = 481

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/53 (49%), Positives = 33/53 (62%)
 Frame = +1

Query: 25  PKISQKF*SLDKAYEFYNNYAKVVGFSIRSNSTEKDKEGNETIMKEYRCFKEG 183
           PK+  +F S D AY FYN YAKVVGFS+R +   K K     + + + CFKEG
Sbjct: 59  PKVGMEFESEDDAYVFYNRYAKVVGFSVRKDFLNKSKVNGTVVSRRFTCFKEG 111


>ref|XP_002275362.2| PREDICTED: protein FAR1-RELATED SEQUENCE 12-like [Vitis vinifera]
          Length = 738

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/59 (42%), Positives = 38/59 (64%)
 Frame = +1

Query: 4   EVKEDCKPKISQKF*SLDKAYEFYNNYAKVVGFSIRSNSTEKDKEGNETIMKEYRCFKE 180
           E   D  PKI  +F S D+AYEFY+NYA++ GF++R+N  +K +   E + + + C KE
Sbjct: 48  EAGMDMVPKIGMEFESDDQAYEFYSNYARLTGFTVRNNHLDKSEMNGEVLARRFPCSKE 106


Top