BLASTX nr result

ID: Coptis21_contig00038897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038897
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596392.1| hypothetical protein MTR_2g076760 [Medicago ...    44   2e-07
ref|XP_003614444.1| hypothetical protein MTR_5g053720 [Medicago ...    42   3e-07
ref|XP_003631099.1| hypothetical protein MTR_8g107120 [Medicago ...    40   4e-07
ref|XP_003608519.1| hypothetical protein MTR_4g096970 [Medicago ...    42   5e-07
ref|XP_003636737.1| hypothetical protein MTR_054s0011 [Medicago ...    39   1e-06

>ref|XP_003596392.1| hypothetical protein MTR_2g076760 [Medicago truncatula]
           gi|355485440|gb|AES66643.1| hypothetical protein
           MTR_2g076760 [Medicago truncatula]
          Length = 513

 Score = 43.9 bits (102), Expect(2) = 2e-07
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = -1

Query: 229 KEKWHPTGEWFITPIGKGFLFIRFSNAEDMNRVWAQGSWNFE 104
           +++W  TGEW + P+G+GF    F++  D+  VWA G+ N +
Sbjct: 103 QKQWKTTGEWSMRPLGRGFFEFTFASNIDLRMVWASGTVNLK 144



 Score = 36.2 bits (82), Expect(2) = 2e-07
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -2

Query: 96  LFRLSQWSPNFNPDLQRQSHALVWIRLPGLAQ 1
           + RL +W+ +FN   QR +HA VWIRL  L Q
Sbjct: 147 VLRLFEWTKDFNMHKQRNTHAQVWIRLMELPQ 178


>ref|XP_003614444.1| hypothetical protein MTR_5g053720 [Medicago truncatula]
           gi|355515779|gb|AES97402.1| hypothetical protein
           MTR_5g053720 [Medicago truncatula]
          Length = 524

 Score = 42.4 bits (98), Expect(2) = 3e-07
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = -1

Query: 229 KEKWHPTGEWFITPIGKGFLFIRFSNAEDMNRVWAQGSWNFE 104
           +++W  +GEW + P+G+GF    FS+  ++  VWA G+ N +
Sbjct: 104 QKQWKTSGEWSMRPLGRGFFEFTFSSDTNLRMVWASGTVNLK 145



 Score = 37.0 bits (84), Expect(2) = 3e-07
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = -2

Query: 96  LFRLSQWSPNFNPDLQRQSHALVWIRLPGLAQ 1
           + RL +W+ +FN + QR +HA VWIRL  L Q
Sbjct: 148 VLRLFEWTKDFNMNKQRNTHAQVWIRLMELPQ 179


>ref|XP_003631099.1| hypothetical protein MTR_8g107120 [Medicago truncatula]
           gi|355525121|gb|AET05575.1| hypothetical protein
           MTR_8g107120 [Medicago truncatula]
          Length = 631

 Score = 40.0 bits (92), Expect(2) = 4e-07
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -2

Query: 96  LFRLSQWSPNFNPDLQRQSHALVWIRLPGLAQ 1
           L RLSQW+ +FN + Q Q+HA +WIRL  L Q
Sbjct: 156 LLRLSQWTKDFNHNSQAQTHASLWIRLVELPQ 187



 Score = 38.9 bits (89), Expect(2) = 4e-07
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = -1

Query: 250 YKGRNLAKEK---WHPTGEWFITPIGKGFLFIRFSNAEDMNRVWAQGS 116
           Y  R LA +    W    +W + P+GKG+    F +++D++R+W  G+
Sbjct: 102 YTARGLASKLSKVWKMINQWKMVPLGKGYYDFLFEHSDDLSRIWTAGT 149


>ref|XP_003608519.1| hypothetical protein MTR_4g096970 [Medicago truncatula]
           gi|355509574|gb|AES90716.1| hypothetical protein
           MTR_4g096970 [Medicago truncatula]
          Length = 618

 Score = 42.0 bits (97), Expect(2) = 5e-07
 Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -1

Query: 250 YKGRNLA---KEKWHPTGEWFITPIGKGFLFIRFSNAEDMNRVWAQGSWNFE 104
           Y  R+L+   ++ W  +  W + P+GKG+    F +A+D+ ++WA G+ N +
Sbjct: 133 YSARDLSNKIEKLWKTSAGWKMVPLGKGYYDFHFDSADDLGKIWAAGTVNLK 184



 Score = 36.6 bits (83), Expect(2) = 5e-07
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -2

Query: 96  LFRLSQWSPNFNPDLQRQSHALVWIRLPGLAQ 1
           L RLSQW+ +F    Q+Q+H  +WIRL  L Q
Sbjct: 187 LLRLSQWTKDFKYHAQKQTHVSLWIRLVELPQ 218


>ref|XP_003636737.1| hypothetical protein MTR_054s0011 [Medicago truncatula]
           gi|355502672|gb|AES83875.1| hypothetical protein
           MTR_054s0011 [Medicago truncatula]
          Length = 520

 Score = 39.3 bits (90), Expect(2) = 1e-06
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = -2

Query: 96  LFRLSQWSPNFNPDLQRQSHALVWIRLPGLAQ 1
           L RL +WS +FN + QR +HA VWIRL  L Q
Sbjct: 281 LLRLFEWSKDFNMNTQRNTHAQVWIRLLELPQ 312



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1

Query: 220 WHPTGEWFITPIGKGFLFIRFSNAEDMNRVWAQGSWNFE 104
           W   G+W +  +G+GF    FSN  D+  VWA G+ N +
Sbjct: 240 WKIRGKWCMLSLGRGFYEFFFSNETDIRMVWAAGTMNLK 278


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