BLASTX nr result
ID: Coptis21_contig00038895
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00038895 (268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003517942.1| PREDICTED: squamosa promoter-binding-like pr... 67 2e-09 ref|XP_002274502.2| PREDICTED: squamosa promoter-binding-like pr... 65 6e-09 emb|CBI16615.3| unnamed protein product [Vitis vinifera] 65 6e-09 ref|XP_002302512.1| hypothetical protein POPTRDRAFT_755123 [Popu... 64 1e-08 ref|XP_003530170.1| PREDICTED: uncharacterized protein LOC100780... 62 6e-08 >ref|XP_003517942.1| PREDICTED: squamosa promoter-binding-like protein 7-like [Glycine max] Length = 344 Score = 66.6 bits (161), Expect = 2e-09 Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 2/68 (2%) Frame = -1 Query: 268 QQHHHPSLYAGT-SHVHPDPHLTCLKLGKRHYFEDGNG-GVSSVAAAPLFAERHVVDAFP 95 QQ HP Y G SHVHPDPHL CLKLGKRHYFED +G G SVAAA V+ Sbjct: 97 QQQQHP--YGGDGSHVHPDPHLMCLKLGKRHYFEDTSGSGSGSVAAAATLGGGLVLG--- 151 Query: 94 FEKRGRSY 71 +KRG+ Y Sbjct: 152 -DKRGKGY 158 >ref|XP_002274502.2| PREDICTED: squamosa promoter-binding-like protein 7-like [Vitis vinifera] Length = 461 Score = 65.1 bits (157), Expect = 6e-09 Identities = 28/40 (70%), Positives = 31/40 (77%), Gaps = 1/40 (2%) Frame = -1 Query: 262 HHHPSLYAGT-SHVHPDPHLTCLKLGKRHYFEDGNGGVSS 146 HH SLY G SH+HPDPHL CLKLGKRHYFED G+S+ Sbjct: 91 HHQQSLYGGDGSHLHPDPHLMCLKLGKRHYFEDSTPGIST 130 >emb|CBI16615.3| unnamed protein product [Vitis vinifera] Length = 404 Score = 65.1 bits (157), Expect = 6e-09 Identities = 28/40 (70%), Positives = 31/40 (77%), Gaps = 1/40 (2%) Frame = -1 Query: 262 HHHPSLYAGT-SHVHPDPHLTCLKLGKRHYFEDGNGGVSS 146 HH SLY G SH+HPDPHL CLKLGKRHYFED G+S+ Sbjct: 91 HHQQSLYGGDGSHLHPDPHLMCLKLGKRHYFEDSTPGIST 130 >ref|XP_002302512.1| hypothetical protein POPTRDRAFT_755123 [Populus trichocarpa] gi|222844238|gb|EEE81785.1| hypothetical protein POPTRDRAFT_755123 [Populus trichocarpa] Length = 398 Score = 63.9 bits (154), Expect = 1e-08 Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 3/63 (4%) Frame = -1 Query: 250 SLYAGTSHV-HPDPHLTCLKLGKRHYFED--GNGGVSSVAAAPLFAERHVVDAFPFEKRG 80 SLYAG + HPDPHL CLKLGKRHYFED N ++ + ++RHVV F KRG Sbjct: 90 SLYAGDGSILHPDPHLMCLKLGKRHYFEDSTSNNNINPI------SDRHVVGGFSVGKRG 143 Query: 79 RSY 71 + Y Sbjct: 144 KPY 146 >ref|XP_003530170.1| PREDICTED: uncharacterized protein LOC100780159 [Glycine max] Length = 342 Score = 61.6 bits (148), Expect = 6e-08 Identities = 39/74 (52%), Positives = 43/74 (58%), Gaps = 10/74 (13%) Frame = -1 Query: 262 HHHPSLYAGTS-HVHPDPHLTCLKLGKRHYFED--GNGGVSSVAAAPLFAERHVVD---- 104 HHH LY G HV DPHLTCL LGKRHYFED NG V++ A PL RHV Sbjct: 64 HHHQQLYGGEGCHVQADPHLTCLHLGKRHYFEDVTTNGDVNN--ATPL-GNRHVCSGGGA 120 Query: 103 AFPF---EKRGRSY 71 + F +KRGR Y Sbjct: 121 GYVFAGNDKRGRGY 134