BLASTX nr result

ID: Coptis21_contig00038895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038895
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517942.1| PREDICTED: squamosa promoter-binding-like pr...    67   2e-09
ref|XP_002274502.2| PREDICTED: squamosa promoter-binding-like pr...    65   6e-09
emb|CBI16615.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002302512.1| hypothetical protein POPTRDRAFT_755123 [Popu...    64   1e-08
ref|XP_003530170.1| PREDICTED: uncharacterized protein LOC100780...    62   6e-08

>ref|XP_003517942.1| PREDICTED: squamosa promoter-binding-like protein 7-like [Glycine
           max]
          Length = 344

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
 Frame = -1

Query: 268 QQHHHPSLYAGT-SHVHPDPHLTCLKLGKRHYFEDGNG-GVSSVAAAPLFAERHVVDAFP 95
           QQ  HP  Y G  SHVHPDPHL CLKLGKRHYFED +G G  SVAAA       V+    
Sbjct: 97  QQQQHP--YGGDGSHVHPDPHLMCLKLGKRHYFEDTSGSGSGSVAAAATLGGGLVLG--- 151

Query: 94  FEKRGRSY 71
            +KRG+ Y
Sbjct: 152 -DKRGKGY 158


>ref|XP_002274502.2| PREDICTED: squamosa promoter-binding-like protein 7-like [Vitis
           vinifera]
          Length = 461

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/40 (70%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
 Frame = -1

Query: 262 HHHPSLYAGT-SHVHPDPHLTCLKLGKRHYFEDGNGGVSS 146
           HH  SLY G  SH+HPDPHL CLKLGKRHYFED   G+S+
Sbjct: 91  HHQQSLYGGDGSHLHPDPHLMCLKLGKRHYFEDSTPGIST 130


>emb|CBI16615.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/40 (70%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
 Frame = -1

Query: 262 HHHPSLYAGT-SHVHPDPHLTCLKLGKRHYFEDGNGGVSS 146
           HH  SLY G  SH+HPDPHL CLKLGKRHYFED   G+S+
Sbjct: 91  HHQQSLYGGDGSHLHPDPHLMCLKLGKRHYFEDSTPGIST 130


>ref|XP_002302512.1| hypothetical protein POPTRDRAFT_755123 [Populus trichocarpa]
           gi|222844238|gb|EEE81785.1| hypothetical protein
           POPTRDRAFT_755123 [Populus trichocarpa]
          Length = 398

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
 Frame = -1

Query: 250 SLYAGTSHV-HPDPHLTCLKLGKRHYFED--GNGGVSSVAAAPLFAERHVVDAFPFEKRG 80
           SLYAG   + HPDPHL CLKLGKRHYFED   N  ++ +      ++RHVV  F   KRG
Sbjct: 90  SLYAGDGSILHPDPHLMCLKLGKRHYFEDSTSNNNINPI------SDRHVVGGFSVGKRG 143

Query: 79  RSY 71
           + Y
Sbjct: 144 KPY 146


>ref|XP_003530170.1| PREDICTED: uncharacterized protein LOC100780159 [Glycine max]
          Length = 342

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/74 (52%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
 Frame = -1

Query: 262 HHHPSLYAGTS-HVHPDPHLTCLKLGKRHYFED--GNGGVSSVAAAPLFAERHVVD---- 104
           HHH  LY G   HV  DPHLTCL LGKRHYFED   NG V++  A PL   RHV      
Sbjct: 64  HHHQQLYGGEGCHVQADPHLTCLHLGKRHYFEDVTTNGDVNN--ATPL-GNRHVCSGGGA 120

Query: 103 AFPF---EKRGRSY 71
            + F   +KRGR Y
Sbjct: 121 GYVFAGNDKRGRGY 134


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