BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038867
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65005.1| hypothetical protein VITISV_023491 [Vitis vinifera]    76   2e-12
gb|AAO26694.1|AF478385_1 gag-pol polyprotein [Vitis vinifera]          74   1e-11
gb|AAO26693.1|AF478384_1 gag-pol polyprotein [Vitis vinifera]          74   1e-11
gb|AAO26692.1|AF478383_1 gag-pol polyprotein [Vitis vinifera]          74   1e-11
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            74   1e-11

>emb|CAN65005.1| hypothetical protein VITISV_023491 [Vitis vinifera]
          Length = 1058

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/95 (37%), Positives = 57/95 (60%)
 Frame = +1

Query: 10  EIISFSSKLIEQRLTGPNYHHWKKVVFFAVCGLGKEQHFTDDPPDDKSADFLAWRRDDAR 189
           +I+   SK+IE +L G NY  W K + F +  + K+ H T++PP+D +     W +DDAR
Sbjct: 10  DIVHVVSKIIEHKLNGSNYIAWNKTIKFYLRSVAKDDHLTEEPPNDNTRKL--WVQDDAR 67

Query: 190 LYTQLINSMEPHIAELVTHADTVKGIWAHLGLLYS 294
           L+ Q+ NS+   I  L++H + VK +  +L  LYS
Sbjct: 68  LFLQIKNSINSDIVSLLSHYEFVKELMDYLNFLYS 102


>gb|AAO26694.1|AF478385_1 gag-pol polyprotein [Vitis vinifera]
          Length = 110

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/97 (35%), Positives = 57/97 (58%)
 Frame = +1

Query: 4   MSEIISFSSKLIEQRLTGPNYHHWKKVVFFAVCGLGKEQHFTDDPPDDKSADFLAWRRDD 183
           +++I+   SK+ E +L G NY  W K +   +  + K+ H T++PP+D +     W +DD
Sbjct: 8   IADIVPIVSKITEHKLNGSNYIEWSKTIKIYLRSVAKDDHLTEEPPNDHTRKL--WMQDD 65

Query: 184 ARLYTQLINSMEPHIAELVTHADTVKGIWAHLGLLYS 294
           ARL+ Q+ NS+   I  L++H + VK +  +L  LYS
Sbjct: 66  ARLFLQMKNSINSDIVGLLSHCEFVKELMDYLDFLYS 102


>gb|AAO26693.1|AF478384_1 gag-pol polyprotein [Vitis vinifera]
          Length = 120

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/97 (35%), Positives = 57/97 (58%)
 Frame = +1

Query: 4   MSEIISFSSKLIEQRLTGPNYHHWKKVVFFAVCGLGKEQHFTDDPPDDKSADFLAWRRDD 183
           +++I+   SK+ E +L G NY  W K +   +  + K+ H T++PP+D +     W +DD
Sbjct: 8   IADIVPIVSKITEHKLNGSNYIEWSKTIKIYLRSVAKDDHLTEEPPNDHTRKL--WMQDD 65

Query: 184 ARLYTQLINSMEPHIAELVTHADTVKGIWAHLGLLYS 294
           ARL+ Q+ NS+   I  L++H + VK +  +L  LYS
Sbjct: 66  ARLFLQMKNSINSDIVGLLSHCEFVKELMDYLDFLYS 102


>gb|AAO26692.1|AF478383_1 gag-pol polyprotein [Vitis vinifera]
          Length = 120

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/97 (35%), Positives = 57/97 (58%)
 Frame = +1

Query: 4   MSEIISFSSKLIEQRLTGPNYHHWKKVVFFAVCGLGKEQHFTDDPPDDKSADFLAWRRDD 183
           +++I+   SK+ E +L G NY  W K +   +  + K+ H T++PP+D +     W +DD
Sbjct: 8   VADIVPIVSKITEHKLNGSNYIEWSKTIKIYLRSVAKDDHLTEEPPNDHTRKL--WMQDD 65

Query: 184 ARLYTQLINSMEPHIAELVTHADTVKGIWAHLGLLYS 294
           ARL+ Q+ NS+   I  L++H + VK +  +L  LYS
Sbjct: 66  ARLFLQMKNSINSDIVGLLSHCEFVKELMDYLDFLYS 102


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/97 (35%), Positives = 57/97 (58%)
 Frame = +1

Query: 4   MSEIISFSSKLIEQRLTGPNYHHWKKVVFFAVCGLGKEQHFTDDPPDDKSADFLAWRRDD 183
           +++I+   SK+ E +L G NY  W K +   +  + K+ H T++PP+D +     W +DD
Sbjct: 8   VADIVPIVSKITEHKLNGSNYIEWNKTIKIYLRSVAKDDHLTEEPPNDHTRKL--WMQDD 65

Query: 184 ARLYTQLINSMEPHIAELVTHADTVKGIWAHLGLLYS 294
           ARL+ Q+ NS+   I  L++H + VK +  +L  LYS
Sbjct: 66  ARLFLQMKNSINSDIVGLLSHCEFVKELMDYLDFLYS 102