BLASTX nr result

ID: Coptis21_contig00038858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038858
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54
ref|XP_002327217.1| predicted protein [Populus trichocarpa] gi|2...   214   6e-54
emb|CBI27914.3| unnamed protein product [Vitis vinifera]              211   5e-53
ref|XP_002282186.1| PREDICTED: angio-associated migratory cell p...   211   5e-53
gb|ABS32230.1| transducin family protein [Carica papaya] gi|1645...   211   5e-53

>ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|222862888|gb|EEF00395.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  215 bits (547), Expect = 3e-54
 Identities = 96/139 (69%), Positives = 113/139 (81%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   VQVWDICSSSHKCTFDGPED-IEWVRWHPRGHFVLAGSMDDFTVWLWDIDEDAYLYTFFG 182
           VQ+WD  S +HKC  +GP++ IEWVRWHP+GH VLAGS +D +VW+W+ D  AYL +F G
Sbjct: 127 VQIWDASSGNHKCVLEGPDEGIEWVRWHPKGHLVLAGS-EDKSVWMWNADRGAYLNSFTG 185

Query: 183 HERGVTCGDFTPDGNTICTGSDDTSLRIWNPEDGNNIHVVQGHSYHTEGLTCLTITSDSA 362
           HE  VTCGDFTPDG TICTGSDD SLRIWNP+ G NIHVV+GH YHT+GLTCL ++SDS 
Sbjct: 186 HEASVTCGDFTPDGKTICTGSDDASLRIWNPKSGENIHVVRGHPYHTDGLTCLALSSDST 245

Query: 363 LAITGSSDCSVHIVNIRTG 419
           LAITGS D SVHIVNI +G
Sbjct: 246 LAITGSKDNSVHIVNITSG 264


>ref|XP_002327217.1| predicted protein [Populus trichocarpa] gi|222835587|gb|EEE74022.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  214 bits (545), Expect = 6e-54
 Identities = 97/139 (69%), Positives = 113/139 (81%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   VQVWDICSSSHKCTFDGPED-IEWVRWHPRGHFVLAGSMDDFTVWLWDIDEDAYLYTFFG 182
           VQ+WD  S + KC  +GP++ IEWVRWHP+GH VLAGS +D TVW+W+ D+ AYL +F G
Sbjct: 115 VQIWDASSGNLKCVLEGPDEGIEWVRWHPKGHLVLAGS-EDKTVWMWNADKGAYLNSFAG 173

Query: 183 HERGVTCGDFTPDGNTICTGSDDTSLRIWNPEDGNNIHVVQGHSYHTEGLTCLTITSDSA 362
           HE  VTCGDFTPDG TICTGSDD SLRIWNP+ G NIHVV+GH YHT+GLTCL ++SDS 
Sbjct: 174 HEASVTCGDFTPDGKTICTGSDDASLRIWNPKSGENIHVVRGHPYHTDGLTCLALSSDST 233

Query: 363 LAITGSSDCSVHIVNIRTG 419
           LAITGS D SVHIVNI TG
Sbjct: 234 LAITGSKDNSVHIVNITTG 252


>emb|CBI27914.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  211 bits (537), Expect = 5e-53
 Identities = 97/140 (69%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
 Frame = +3

Query: 6   VQVWDICSSSHKCTFDGPED-IEWVRWHPRGHFVLAGSMDDFTVWLWDIDEDAYLYTFFG 182
           V++WD  S   KCT +GP   IEWVRWHPRGH VLAGS +D TVW+W+ D  AYL  F G
Sbjct: 130 VKIWDASSGDLKCTLEGPGGGIEWVRWHPRGHVVLAGS-EDCTVWMWNADRGAYLNMFSG 188

Query: 183 HERGVTCGDFTPDGNTICTGSDDTSLRIWNPEDGNNIHVVQGHSYHTEGLTCLTITSDSA 362
           H   VTCGDFTPDG TICTGSDD +LRIWNP  G NIHVV+GH YHTEGLTCL ITSDS 
Sbjct: 189 HASSVTCGDFTPDGKTICTGSDDATLRIWNPSSGENIHVVRGHPYHTEGLTCLAITSDST 248

Query: 363 LAITGSSDCSVHIVNIRTGE 422
           LA+TGS D SVH+VNI TG+
Sbjct: 249 LALTGSKDSSVHVVNITTGK 268


>ref|XP_002282186.1| PREDICTED: angio-associated migratory cell protein-like [Vitis
           vinifera]
          Length = 391

 Score =  211 bits (537), Expect = 5e-53
 Identities = 97/140 (69%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
 Frame = +3

Query: 6   VQVWDICSSSHKCTFDGPED-IEWVRWHPRGHFVLAGSMDDFTVWLWDIDEDAYLYTFFG 182
           V++WD  S   KCT +GP   IEWVRWHPRGH VLAGS +D TVW+W+ D  AYL  F G
Sbjct: 128 VKIWDASSGDLKCTLEGPGGGIEWVRWHPRGHVVLAGS-EDCTVWMWNADRGAYLNMFSG 186

Query: 183 HERGVTCGDFTPDGNTICTGSDDTSLRIWNPEDGNNIHVVQGHSYHTEGLTCLTITSDSA 362
           H   VTCGDFTPDG TICTGSDD +LRIWNP  G NIHVV+GH YHTEGLTCL ITSDS 
Sbjct: 187 HASSVTCGDFTPDGKTICTGSDDATLRIWNPSSGENIHVVRGHPYHTEGLTCLAITSDST 246

Query: 363 LAITGSSDCSVHIVNIRTGE 422
           LA+TGS D SVH+VNI TG+
Sbjct: 247 LALTGSKDSSVHVVNITTGK 266


>gb|ABS32230.1| transducin family protein [Carica papaya]
           gi|164522082|gb|ABY60781.1| transducin family protein
           [Carica papaya]
          Length = 408

 Score =  211 bits (537), Expect = 5e-53
 Identities = 97/140 (69%), Positives = 110/140 (78%), Gaps = 1/140 (0%)
 Frame = +3

Query: 6   VQVWDICSSSHKCTFDGPED-IEWVRWHPRGHFVLAGSMDDFTVWLWDIDEDAYLYTFFG 182
           VQ+WD  S + KC  +GPE  IEWVRWHPRGH VLAGS +D TVW+W+ D  AYL  F G
Sbjct: 127 VQIWDASSGNIKCALEGPEKGIEWVRWHPRGHLVLAGS-EDCTVWMWNADRGAYLNMFSG 185

Query: 183 HERGVTCGDFTPDGNTICTGSDDTSLRIWNPEDGNNIHVVQGHSYHTEGLTCLTITSDSA 362
           H   VTCGDFTPDG TICTGSDD +LRIWNP  G NIHVV+GH YHTEGLTCL ++SDS+
Sbjct: 186 HGSSVTCGDFTPDGKTICTGSDDATLRIWNPRSGENIHVVKGHPYHTEGLTCLAMSSDSS 245

Query: 363 LAITGSSDCSVHIVNIRTGE 422
           LA+TGS D SVHIVNI TG+
Sbjct: 246 LALTGSKDSSVHIVNIVTGK 265


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