BLASTX nr result

ID: Coptis21_contig00038852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038852
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255...   135   3e-30
emb|CBI40569.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002523320.1| nucleotide binding protein, putative [Ricinu...   132   3e-29
ref|XP_003548413.1| PREDICTED: uncharacterized protein LOC100795...   126   2e-27

>ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|222844366|gb|EEE81913.1|
           predicted protein [Populus trichocarpa]
          Length = 2434

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/117 (56%), Positives = 87/117 (74%)
 Frame = -3

Query: 353 TTSNQNEELSLTNDLPLKLLNAQTIPPCPTRSQSTIDYLPDYSTLSWIAYAASSLLVISH 174
           T S     ++ T+ LPL L  +  IPP PTRS STID+LPD+S  SW+AY ASSLLVISH
Sbjct: 6   TASPTRASINPTDHLPLSLFRSDIIPPAPTRSASTIDWLPDFSGYSWVAYGASSLLVISH 65

Query: 173 FPSPNSEQQSLIGPIYRQVIDISNDGSSIIKAVSWSPVFPSVGEVAVAVENCICLYS 3
            PSP S +++ IGPI +QV ++S+D SS +K+VSWSPV PS+GE+A A +NCI ++S
Sbjct: 66  LPSPLSPEEAAIGPILQQVFELSSDDSSPVKSVSWSPVTPSIGELAAASDNCISVFS 122


>ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255258 [Vitis vinifera]
          Length = 2572

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/109 (55%), Positives = 83/109 (76%)
 Frame = -3

Query: 329 LSLTNDLPLKLLNAQTIPPCPTRSQSTIDYLPDYSTLSWIAYAASSLLVISHFPSPNSEQ 150
           + L   LPL+ + +  IPP PT SQ  +D+LPD++ LSW+AY AS+LLVISHFPSP S +
Sbjct: 30  VDLPGQLPLQFVKSDPIPPAPTPSQFAVDWLPDFAGLSWVAYGASTLLVISHFPSPLSSE 89

Query: 149 QSLIGPIYRQVIDISNDGSSIIKAVSWSPVFPSVGEVAVAVENCICLYS 3
           ++LIGPI+RQV++I+ D S+ +  V WSP  PSVGE+AVA  NC+C++S
Sbjct: 90  EALIGPIFRQVVEIAADESAAVSVVGWSPATPSVGELAVASGNCVCVFS 138


>emb|CBI40569.3| unnamed protein product [Vitis vinifera]
          Length = 2065

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/109 (55%), Positives = 83/109 (76%)
 Frame = -3

Query: 329 LSLTNDLPLKLLNAQTIPPCPTRSQSTIDYLPDYSTLSWIAYAASSLLVISHFPSPNSEQ 150
           + L   LPL+ + +  IPP PT SQ  +D+LPD++ LSW+AY AS+LLVISHFPSP S +
Sbjct: 8   VDLPGQLPLQFVKSDPIPPAPTPSQFAVDWLPDFAGLSWVAYGASTLLVISHFPSPLSSE 67

Query: 149 QSLIGPIYRQVIDISNDGSSIIKAVSWSPVFPSVGEVAVAVENCICLYS 3
           ++LIGPI+RQV++I+ D S+ +  V WSP  PSVGE+AVA  NC+C++S
Sbjct: 68  EALIGPIFRQVVEIAADESAAVSVVGWSPATPSVGELAVASGNCVCVFS 116


>ref|XP_002523320.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223537408|gb|EEF39036.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 2299

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/103 (60%), Positives = 79/103 (76%)
 Frame = -3

Query: 311 LPLKLLNAQTIPPCPTRSQSTIDYLPDYSTLSWIAYAASSLLVISHFPSPNSEQQSLIGP 132
           LPL ++ ++ IPP PTRS+STID+LPD+S  +WIAY ASSLLVISH PSP S  + LIGP
Sbjct: 17  LPLSIIGSEIIPPAPTRSESTIDWLPDFSGYAWIAYGASSLLVISHLPSPMSSDEFLIGP 76

Query: 131 IYRQVIDISNDGSSIIKAVSWSPVFPSVGEVAVAVENCICLYS 3
           I RQV ++S D SS + +VSWS V PS+GE+A A  NCI ++S
Sbjct: 77  ILRQVFELSGDHSSAVTSVSWSSVTPSIGELAAASNNCIYVFS 119


>ref|XP_003548413.1| PREDICTED: uncharacterized protein LOC100795225 [Glycine max]
          Length = 2369

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/110 (55%), Positives = 81/110 (73%)
 Frame = -3

Query: 335 EELSLTNDLPLKLLNAQTIPPCPTRSQSTIDYLPDYSTLSWIAYAASSLLVISHFPSPNS 156
           E+++  + LPL+LL + T+PP PT S+ST+D+LPD+S  SWIAYAASSLL ISHFPSP S
Sbjct: 5   EKMNPIDHLPLRLLRSDTVPPAPTLSESTVDFLPDFSGYSWIAYAASSLLTISHFPSPLS 64

Query: 155 EQQSLIGPIYRQVIDISNDGSSIIKAVSWSPVFPSVGEVAVAVENCICLY 6
             Q+ IGPI+RQ   +S D    + AV+WSP  PS G++A A +NCI L+
Sbjct: 65  PHQTRIGPIFRQSFQLSADP---LAAVAWSPSSPSSGDLAAAADNCISLF 111


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