BLASTX nr result

ID: Coptis21_contig00038840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038840
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542703.1| PREDICTED: uncharacterized protein LOC100800...    64   2e-08
ref|XP_003544160.1| PREDICTED: uncharacterized protein LOC100799...    63   3e-08
ref|XP_003614856.1| hypothetical protein MTR_5g060420 [Medicago ...    62   4e-08
ref|XP_002513834.1| conserved hypothetical protein [Ricinus comm...    60   1e-07
ref|XP_004163112.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    59   5e-07

>ref|XP_003542703.1| PREDICTED: uncharacterized protein LOC100800475 [Glycine max]
          Length = 621

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 52/128 (40%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
 Frame = -1

Query: 360 NGSMMHEKNGYSVAYNSFGRNRHYRDCDAYHNGERSVQGGYRDPYPTAFEVSNYFTGR-- 187
           NGS  H       AY+SF  NR +RD D     +RS  G + D    +  ++N F GR  
Sbjct: 78  NGSAKH-------AYSSF--NRSHRDKDRDREKDRSSFGDHWD-CDGSDPLANLFPGRME 127

Query: 186 NDAYKRSQSMVVSGKNGEFCSQRKATDSRK---EYNNNN---AGAAVTGSIQKAVFEKRF 25
            D  +RS SMV S K  E   +R A D++      NN+N   +G+ V+ SIQKAVF+K F
Sbjct: 128 RDTLRRSHSMV-SRKQSEVIPRRVAVDTKSGGSHQNNSNGILSGSNVSSSIQKAVFDKDF 186

Query: 24  PSLEAEER 1
           PSL  EE+
Sbjct: 187 PSLSTEEK 194


>ref|XP_003544160.1| PREDICTED: uncharacterized protein LOC100799079 [Glycine max]
          Length = 618

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 51/128 (39%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
 Frame = -1

Query: 360 NGSMMHEKNGYSVAYNSFGRNRHYRDCDAYHNGERSVQGGYRDPYPTAFEVSNYFTGR-- 187
           NGS  H       AY+SF  NR++RD D     +RS  G + D    +  ++N F GR  
Sbjct: 74  NGSAKH-------AYSSF--NRNHRDKDRDREKDRSSFGDHWD-CDGSDPLANIFPGRME 123

Query: 186 NDAYKRSQSMVVSGKNGEFCSQRKATDSRK---EYNNNN---AGAAVTGSIQKAVFEKRF 25
            D  +RS SMV S K  E   +R   D++      NN+N   +G+ V+ SIQKAVF+K F
Sbjct: 124 RDTLRRSHSMV-SRKQNEVIPRRVVVDTKSGGSHQNNSNGILSGSNVSNSIQKAVFDKDF 182

Query: 24  PSLEAEER 1
           PSL  EE+
Sbjct: 183 PSLSTEEK 190


>ref|XP_003614856.1| hypothetical protein MTR_5g060420 [Medicago truncatula]
           gi|355516191|gb|AES97814.1| hypothetical protein
           MTR_5g060420 [Medicago truncatula]
          Length = 685

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 52/129 (40%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
 Frame = -1

Query: 360 NGSMMHEKNGYSVAYNSFGRNRHYRDCDAYHNGERSVQGGYRDPYPTAFEVSNYFTGR-- 187
           NGS  H       AY+SF  NR++RD D     +RS  G + D    +  + N F+GR  
Sbjct: 80  NGSAKH-------AYSSF--NRNHRDKDRDREKDRSNFGDHWDR-DGSDPLVNLFSGRIE 129

Query: 186 NDAYKRSQSMVVSGKNGEFCSQRKATDSRK----EYNNNNAG---AAVTGSIQKAVFEKR 28
            D  +RS SMV S K GE   +R A D++      +NN N      +V  SIQKAVF+K 
Sbjct: 130 RDTLRRSHSMV-SRKQGETLPRRVAADTKSGGSSNHNNGNGALSVGSVGSSIQKAVFDKD 188

Query: 27  FPSLEAEER 1
           FPSL A+E+
Sbjct: 189 FPSLGADEK 197


>ref|XP_002513834.1| conserved hypothetical protein [Ricinus communis]
           gi|223546920|gb|EEF48417.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 596

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 51/129 (39%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
 Frame = -1

Query: 366 TTNGSMMHEKNGYSVAYNSFGRNRHYRDCDAYHNGERSVQGGYRDPYPTAFEVSNYFTGR 187
           ++NGS  H       AY+SF R+  +RD D   + ER   G + D   +    S      
Sbjct: 76  SSNGSAKH-------AYSSFSRS--HRDKDRERDKERLNFGNHWDNDASDPLGSILSRNE 126

Query: 186 NDAYKRSQSMVVSGKNGEFCSQRKATDSRKEYNNNN-------AGAAVTGSIQKAVFEKR 28
            DA +RS SMV S K GE   +R A D R   N+N+       +G  V  SI KAVFEK 
Sbjct: 127 KDALRRSHSMV-SRKLGEVLPRRFAADLRNGSNSNHVNGNGLISGGGVGNSIPKAVFEKD 185

Query: 27  FPSLEAEER 1
           FPSL +EER
Sbjct: 186 FPSLGSEER 194


>ref|XP_004163112.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101231906 [Cucumis sativus]
          Length = 536

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 51/127 (40%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
 Frame = -1

Query: 366 TTNGSMMHEKNGYSVAYNSFGRNRHYRDCDAYHNGERSVQGGY--RDPY-PTAFEVSNYF 196
           ++NGS  H       AY+SF  NR +RD D     +R   G    RD + P    +SN  
Sbjct: 75  SSNGSSKH-------AYSSF--NRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKILSNRI 125

Query: 195 TGRNDAYKRSQSMVVSGKNGEFCSQRKATDSRKEYNNNN--AGAAVTGSIQKAVFEKRFP 22
               DA +RS SMV S K GE   +R  T+ +   ++N   +G +V  SIQKAVFEK FP
Sbjct: 126 D--KDALRRSHSMV-SRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKDFP 182

Query: 21  SLEAEER 1
           SL +EE+
Sbjct: 183 SLGSEEK 189


Top