BLASTX nr result

ID: Coptis21_contig00038819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038819
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272977.1| PREDICTED: uncharacterized protein LOC100260...    75   2e-15
ref|XP_002306431.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-08
ref|XP_002521722.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
ref|XP_003516523.1| PREDICTED: uncharacterized protein LOC100789...    60   1e-07

>ref|XP_002272977.1| PREDICTED: uncharacterized protein LOC100260782 [Vitis vinifera]
          Length = 872

 Score = 75.5 bits (184), Expect(2) = 2e-15
 Identities = 47/117 (40%), Positives = 64/117 (54%)
 Frame = -2

Query: 448 KFEKPRPREHPXXXXXXXXXXXXEAWQAARLWEHSGVVEHGSIPRQWVAREDLNKERTAF 269
           K  KPRPREHP            EAWQAAR  E + VVE  SIPR+ +A+E+LNKE+ A 
Sbjct: 174 KLGKPRPREHPQEEELQKFKKEFEAWQAARFRECASVVELDSIPRKLLAQENLNKEKRAI 233

Query: 268 YPDPKRMTPKEKPTQLEGHTSQHVMKTSSQEKGRLQHQGCDMELVQGVRKEPITLRK 98
           Y +   +   EKP +L+G+     +K     +  LQH G  +EL    +KE  +L +
Sbjct: 234 YSN-SGIIANEKPVELKGND----IKARYHGRSGLQHNGHKLELYPDEQKEYFSLSR 285



 Score = 31.2 bits (69), Expect(2) = 2e-15
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -1

Query: 122 ERTNYSEEESQSNDIQEVHPINQDDQ-GKASAPTRIVILKP 3
           ++  +S   S S D  +   +N D +  K+SAPTRIVILKP
Sbjct: 277 QKEYFSLSRSTSRDFDQSPMMNCDKKLEKSSAPTRIVILKP 317


>ref|XP_002306431.1| predicted protein [Populus trichocarpa] gi|222855880|gb|EEE93427.1|
           predicted protein [Populus trichocarpa]
          Length = 898

 Score = 59.7 bits (143), Expect(2) = 1e-08
 Identities = 41/118 (34%), Positives = 57/118 (48%)
 Frame = -2

Query: 448 KFEKPRPREHPXXXXXXXXXXXXEAWQAARLWEHSGVVEHGSIPRQWVAREDLNKERTAF 269
           K  KP PREHP            EAWQ AR  E+S VVEH S P Q + +E++NK++ A 
Sbjct: 172 KLGKPSPREHPQEEELQNFKKEFEAWQTARFKEYSKVVEHDSTPGQLLVQENINKKKMAL 231

Query: 268 YPDPKRMTPKEKPTQLEGHTSQHVMKTSSQEKGRLQHQGCDMELVQGVRKEPITLRKR 95
             D  R+   E+  + +   S    K  S E+  LQH    +EL    +++    R R
Sbjct: 232 DVD-SRIPASERHAEPKCLAS----KARSHERSGLQHPRHKVELFPDEQEDFFPARNR 284



 Score = 24.3 bits (51), Expect(2) = 1e-08
 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -1

Query: 62  INQDDQ-GKASAPTRIVILKP 3
           IN D++   +SA TRIVILKP
Sbjct: 295 INHDEKLDNSSAHTRIVILKP 315


>ref|XP_002521722.1| conserved hypothetical protein [Ricinus communis]
           gi|223539113|gb|EEF40709.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 866

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 45/123 (36%), Positives = 59/123 (47%)
 Frame = -2

Query: 460 GHRLKFEKPRPREHPXXXXXXXXXXXXEAWQAARLWEHSGVVEHGSIPRQWVAREDLNKE 281
           G+  K EKPRPREHP            EAWQAAR  E S VVE G  P +++A E+ NK+
Sbjct: 150 GNGQKLEKPRPREHPQEEELQKFKKEFEAWQAARFRECSKVVELGRNPDRFLAHENGNKQ 209

Query: 280 RTAFYPDPKRMTPKEKPTQLEGHTSQHVMKTSSQEKGRLQHQGCDMELVQGVRKEPITLR 101
           R A   +       EKP +          K  S+EK  L H+   +E+    RKE  + R
Sbjct: 210 RVALNENLGMSPGSEKPVE---------HKAWSREKASLHHRH-KLEVFPVERKESFSSR 259

Query: 100 KRA 92
             +
Sbjct: 260 NNS 262


>ref|XP_003516523.1| PREDICTED: uncharacterized protein LOC100789616 [Glycine max]
          Length = 572

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 43/131 (32%), Positives = 60/131 (45%)
 Frame = -2

Query: 460 GHRLKFEKPRPREHPXXXXXXXXXXXXEAWQAARLWEHSGVVEHGSIPRQWVAREDLNKE 281
           G    F +PRPREHP            EA+QAAR  E S VVE GS PRQ +A+E+LNKE
Sbjct: 44  GWNRSFGEPRPREHPQEEELQKFKKEFEAYQAARFLECSKVVEIGSAPRQLLAQENLNKE 103

Query: 280 RTAFYPDPKRMTPKEKPTQLEGHTSQHVMKTSSQEKGRLQHQGCDMELVQGVRKEPITLR 101
           +        +     K   L+ H+     K      G  ++ G  M+L+  +++     R
Sbjct: 104 KVMHNDSVLQRAAARKLADLDSHS----FKMPPDSYGS-EYHGNMMDLIPAMQRRTFPPR 158

Query: 100 KRAKVTIFKRS 68
            R     F+ S
Sbjct: 159 SRTLSRDFEES 169


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