BLASTX nr result

ID: Coptis21_contig00038801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038801
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311245.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002316193.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|NP_568155.1| Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagi...    95   7e-18
ref|XP_003616684.1| Peptide-N4-(N-acetyl-beta-glucosaminyl)aspar...    95   7e-18
ref|XP_002873210.1| hypothetical protein ARALYDRAFT_487340 [Arab...    95   7e-18

>ref|XP_002311245.1| predicted protein [Populus trichocarpa] gi|222851065|gb|EEE88612.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/111 (52%), Positives = 77/111 (69%)
 Frame = +3

Query: 6   IKVKTEVKVESDTGDVLTQKTMKSKYPLRVLTSTQPGVENDTYLQTTNVSHAFNEESSVA 185
           I+V+ E +V +D G ++++  +K KYPL+V+T T PG++NDT++  TNV+HA NE     
Sbjct: 423 IEVRREARVLNDVGGLVSRVIVKRKYPLKVITVTLPGLKNDTFMLVTNVTHAVNER---- 478

Query: 186 LLRGKFLSSVSNSQVSGGWMLVQDHSVLSGTASTNQTLVYKDEAGCYSRNV 338
           +  GK  S V N QVS GWM V+DHSVLSG A TNQT V +DE GCY R V
Sbjct: 479 IKNGKLSSHVINKQVSNGWMEVRDHSVLSGEAMTNQTYVCRDELGCYVRTV 529


>ref|XP_002316193.1| predicted protein [Populus trichocarpa] gi|222865233|gb|EEF02364.1|
           predicted protein [Populus trichocarpa]
          Length = 565

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/113 (51%), Positives = 76/113 (67%)
 Frame = +3

Query: 6   IKVKTEVKVESDTGDVLTQKTMKSKYPLRVLTSTQPGVENDTYLQTTNVSHAFNEESSVA 185
           IKV+ E KV +D G ++++  ++ KYPL+V+T T PG++NDT +  TNV+H  NE   + 
Sbjct: 439 IKVRREAKVLNDVGGLVSRVIVRKKYPLKVITVTLPGLKNDTSILVTNVTHEVNERIRI- 497

Query: 186 LLRGKFLSSVSNSQVSGGWMLVQDHSVLSGTASTNQTLVYKDEAGCYSRNVFA 344
              GK  S V+N QVS GWM V+DHSVLSG   TNQT V +DE GCY R V A
Sbjct: 498 ---GKLSSHVNNKQVSNGWMEVKDHSVLSGEVMTNQTYVCRDEFGCYVRIVAA 547


>ref|NP_568155.1| Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
           [Arabidopsis thaliana]
           gi|13605891|gb|AAK32931.1|AF367344_1 AT5g05480/MOP10_2
           [Arabidopsis thaliana] gi|10178125|dbj|BAB11537.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|24111305|gb|AAN46776.1| At5g05480/MOP10_2
           [Arabidopsis thaliana] gi|332003495|gb|AED90878.1|
           Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine
           amidase A protein [Arabidopsis thaliana]
          Length = 608

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/118 (47%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
 Frame = +3

Query: 9   KVKTE--VKVESDTGDVLTQKTMKSKYPLRVLTSTQPGVEND--TYLQTTNVSHAFNEES 176
           +VKTE  V+V S++G  + +   +  YPL V+TST  G+ ND  TY+  TNVSHA NE  
Sbjct: 459 RVKTERIVEVTSESGKPVNRVVHQRTYPLTVITSTLRGLTNDKDTYMLVTNVSHALNETH 518

Query: 177 SVALLRGKFLSSVSNSQVSGGWMLVQDHSVLSGTASTNQTLVYKDEAGCYSRNVFASD 350
           S     G+ L  V + Q S GWM V+DH+VL+G AST Q+L Y DE  CYSR + A++
Sbjct: 519 S----DGEALIQVYSRQDSEGWMEVEDHNVLAGEASTKQSLSYIDEFSCYSRTIVAAN 572


>ref|XP_003616684.1| Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
           [Medicago truncatula] gi|355518019|gb|AES99642.1|
           Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine
           amidase A [Medicago truncatula]
          Length = 604

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
 Frame = +3

Query: 9   KVKTEVKVESDTGDVLTQKTMKSKYPLRVLTSTQPGVENDTYLQTTNVSHAFNEESSVAL 188
           K K +VKV  + G+++++  +K KYPLRV+T T+P   +D Y   T++SH F E+     
Sbjct: 479 KAKKKVKVIDNRGEMISKLKVKRKYPLRVITVTEPHGLDDGYKLVTDLSHGFEEK----- 533

Query: 189 LRGK-FLSSVSNSQVSGGWMLVQDHSVLSGTASTNQTLVYKDEAGCYSRNVFASD 350
             GK F+ SVSN Q S GW+ V  HSVL G AST Q   Y D+  CY+RNV AS+
Sbjct: 534 YEGKGFIHSVSNEQESKGWINVMGHSVLDGHASTMQNYSYVDKLSCYNRNVAASN 588


>ref|XP_002873210.1| hypothetical protein ARALYDRAFT_487340 [Arabidopsis lyrata subsp.
           lyrata] gi|297319047|gb|EFH49469.1| hypothetical protein
           ARALYDRAFT_487340 [Arabidopsis lyrata subsp. lyrata]
          Length = 602

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
 Frame = +3

Query: 9   KVKTE--VKVESDTGDVLTQKTMKSKYPLRVLTSTQPGVENDTYLQTTNVSHAFNEESSV 182
           +VKTE  V+V S++G  + +   +  YPL V+TST  G+  DTY+  TNVSHA NE  S 
Sbjct: 460 RVKTERIVEVTSESGKPVNRFVHQRTYPLTVITSTFRGLTKDTYMLVTNVSHALNETHS- 518

Query: 183 ALLRGKFLSSVSNSQVSGGWMLVQDHSVLSGTASTNQTLVYKDEAGCYSRNVFASD 350
               G+  + V N Q S GWM V+DH+VL+G AST Q+L Y DE  CYS  + A++
Sbjct: 519 ---DGEASTQVYNRQDSEGWMEVEDHNVLAGEASTRQSLSYIDEFSCYSHTIDAAN 571


Top