BLASTX nr result

ID: Coptis21_contig00038793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038793
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305308.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002329306.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_003560561.1| PREDICTED: uncharacterized protein LOC100842...    60   2e-07
ref|XP_002305310.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002305308.1| predicted protein [Populus trichocarpa] gi|222848272|gb|EEE85819.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
 Frame = +1

Query: 1   LIALSLIILICTHWKSSTSSES--EDIEKAPKLSLPPAEMEPKIVVIMAGDRMPTFLANP 174
           LIALSLIIL C++ KSS++S S  E  EK+ K     AEMEPKIVVIMAGD  PT+LA P
Sbjct: 36  LIALSLIILACSYRKSSSNSSSDPEAREKSGKQGEMRAEMEPKIVVIMAGDDNPTYLAEP 95

Query: 175 ASAGEHNLQEV 207
            S    + ++V
Sbjct: 96  VSCNCQSDEQV 106


>ref|XP_002329306.1| predicted protein [Populus trichocarpa] gi|222870760|gb|EEF07891.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
 Frame = +1

Query: 1   LIALSLIILICTHWKSSTSS--ESEDIEKAPKLSLPPAEMEPKIVVIMAGDRMPTFLANP 174
           L+A++L+IL C++ KSS++S  + E  EK+       AEMEPKIVVIMAGD  PT+LANP
Sbjct: 36  LVAVALMILACSYRKSSSTSATDPEVQEKSANQVEMKAEMEPKIVVIMAGDDRPTYLANP 95

Query: 175 ASAGEHNLQEV 207
            S    + ++V
Sbjct: 96  VSCNCQSDEQV 106


>ref|XP_003560561.1| PREDICTED: uncharacterized protein LOC100842297 [Brachypodium
           distachyon]
          Length = 127

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 6/69 (8%)
 Frame = +1

Query: 1   LIALSLIILICTHWKSSTSSESEDIEKAPK----LSLPPAEMEPKIVVIMAGDRMPTFLA 168
           LIA++L++L+CT  K S+S    + E+A      +++ P + EPK+VVIMAGDR+P+FLA
Sbjct: 52  LIAVALLVLVCTRRKPSSSRRPGEDEEAAAAARAIAMAPLDREPKVVVIMAGDRLPSFLA 111

Query: 169 N--PASAGE 189
           +  P +AGE
Sbjct: 112 SARPFAAGE 120


>ref|XP_002305310.1| predicted protein [Populus trichocarpa] gi|222848274|gb|EEE85821.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
 Frame = +1

Query: 1   LIALSLIILICTHWKS---STSSESEDIEKAPKLSLPPAEMEPKIVVIMAGDRMPTFLAN 171
           LI +SLIIL C+  KS   S++SE+ED + A ++ +   E EP IVVIMAGD  PT+LA 
Sbjct: 37  LITVSLIILACSSGKSLSNSSTSEAEDEKSAKQVEIQ-VEFEPNIVVIMAGDDNPTYLAK 95

Query: 172 PAS 180
           P S
Sbjct: 96  PVS 98


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