BLASTX nr result

ID: Coptis21_contig00038749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038749
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269840.2| PREDICTED: AP2-like ethylene-responsive tran...   138   4e-31
emb|CBI17594.3| unnamed protein product [Vitis vinifera]              138   4e-31
emb|CAN63760.1| hypothetical protein VITISV_008633 [Vitis vinifera]   138   4e-31
ref|XP_002514802.1| Protein AINTEGUMENTA, putative [Ricinus comm...   118   4e-25
ref|XP_002316179.1| AP2 domain-containing transcription factor [...   117   1e-24

>ref|XP_002269840.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           BBM-like [Vitis vinifera]
          Length = 730

 Score =  138 bits (348), Expect = 4e-31
 Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 14/127 (11%)
 Frame = +3

Query: 3   FSLSPQELPSHSQNH-------------EISATDVSNDCFDLASDSTDPSLNLPSMRPDG 143
           FSLSP+ELP   +NH             EIS TDVS +CFDL SDST PSLNLP      
Sbjct: 10  FSLSPRELPPQPENHSQNSVSRLGFNSDEISGTDVSGECFDLTSDSTAPSLNLPP----- 64

Query: 144 PFGILEAFNRTHQPHDWNVKDLSMNCDSNYR-TSSEYSMLMGGSTNNHQHLDLEEPKLED 320
           PFGILEAFNR +QP DWN+K L MN D+NY+ T+SE SMLMG S ++H +L+ +EPKLE+
Sbjct: 65  PFGILEAFNRNNQPQDWNMKGLGMNSDTNYKTTTSELSMLMGSSCSSHHNLENQEPKLEN 124

Query: 321 FLGGNSF 341
           FLG  SF
Sbjct: 125 FLGCRSF 131


>emb|CBI17594.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  138 bits (348), Expect = 4e-31
 Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 14/127 (11%)
 Frame = +3

Query: 3   FSLSPQELPSHSQNH-------------EISATDVSNDCFDLASDSTDPSLNLPSMRPDG 143
           FSLSP+ELP   +NH             EIS TDVS +CFDL SDST PSLNLP      
Sbjct: 10  FSLSPRELPPQPENHSQNSVSRLGFNSDEISGTDVSGECFDLTSDSTAPSLNLPP----- 64

Query: 144 PFGILEAFNRTHQPHDWNVKDLSMNCDSNYR-TSSEYSMLMGGSTNNHQHLDLEEPKLED 320
           PFGILEAFNR +QP DWN+K L MN D+NY+ T+SE SMLMG S ++H +L+ +EPKLE+
Sbjct: 65  PFGILEAFNRNNQPQDWNMKGLGMNSDTNYKTTTSELSMLMGSSCSSHHNLENQEPKLEN 124

Query: 321 FLGGNSF 341
           FLG  SF
Sbjct: 125 FLGCRSF 131


>emb|CAN63760.1| hypothetical protein VITISV_008633 [Vitis vinifera]
          Length = 731

 Score =  138 bits (348), Expect = 4e-31
 Identities = 74/127 (58%), Positives = 88/127 (69%), Gaps = 14/127 (11%)
 Frame = +3

Query: 3   FSLSPQELPSHSQNH-------------EISATDVSNDCFDLASDSTDPSLNLPSMRPDG 143
           FSLSP+ELP   +NH             EIS TDVS +CFDL SDST PSLNLP      
Sbjct: 10  FSLSPRELPPQPENHSQNSVSRLGFNSDEISGTDVSGECFDLTSDSTAPSLNLPP----- 64

Query: 144 PFGILEAFNRTHQPHDWNVKDLSMNCDSNYR-TSSEYSMLMGGSTNNHQHLDLEEPKLED 320
           PFGILEAFNR +QP DWN+K L MN D+NY+ T+SE SMLMG S ++H +L+ +EPKLE+
Sbjct: 65  PFGILEAFNRNNQPQDWNMKGLGMNSDTNYKTTTSELSMLMGSSCSSHHNLENQEPKLEN 124

Query: 321 FLGGNSF 341
           FLG  SF
Sbjct: 125 FLGCRSF 131


>ref|XP_002514802.1| Protein AINTEGUMENTA, putative [Ricinus communis]
           gi|223545853|gb|EEF47356.1| Protein AINTEGUMENTA,
           putative [Ricinus communis]
          Length = 729

 Score =  118 bits (296), Expect = 4e-25
 Identities = 68/130 (52%), Positives = 80/130 (61%), Gaps = 17/130 (13%)
 Frame = +3

Query: 3   FSLSPQELPSHSQNH-----------------EISATDVSNDCFDLASDSTDPSLNLPSM 131
           FSLSP ELPSHS +H                 EI   DVS +CFDL SDST PSLNLP+ 
Sbjct: 10  FSLSPHELPSHSDHHQDHHSQNTASRLGFHSDEIPGADVSGECFDLPSDSTAPSLNLPA- 68

Query: 132 RPDGPFGILEAFNRTHQPHDWNVKDLSMNCDSNYRTSSEYSMLMGGSTNNHQHLDLEEPK 311
               PFGILEAF R +Q  DWN+K L MN  + Y+T+S+ SMLMG S N       +EPK
Sbjct: 69  ----PFGILEAF-RNNQSQDWNMKGLGMNPGTTYKTNSDLSMLMGSSCNTQSIDQNQEPK 123

Query: 312 LEDFLGGNSF 341
           LE+FLG +SF
Sbjct: 124 LENFLGVHSF 133


>ref|XP_002316179.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222865219|gb|EEF02350.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 604

 Score =  117 bits (292), Expect = 1e-24
 Identities = 70/130 (53%), Positives = 83/130 (63%), Gaps = 17/130 (13%)
 Frame = +3

Query: 3   FSLSPQELPS--------HSQN---------HEISATDVSNDCFDLASDSTDPSLNLPSM 131
           FSLS QELPS        HSQN          EIS T+VS +CFDL SDST PSLNLP+ 
Sbjct: 7   FSLSHQELPSSQSDHHQDHSQNTDSRLGFHSDEISGTNVSGECFDLTSDSTAPSLNLPAT 66

Query: 132 RPDGPFGILEAFNRTHQPHDWNVKDLSMNCDSNYRTSSEYSMLMGGSTNNHQHLDLEEPK 311
                FGILEAF R +QP DWN+K L MN D+NY+T+S   + MG S N+      +EPK
Sbjct: 67  -----FGILEAF-RNNQPQDWNMKSLGMNPDTNYKTASGLPIFMGTSCNSQTIDQNQEPK 120

Query: 312 LEDFLGGNSF 341
           LE+FLGG+SF
Sbjct: 121 LENFLGGHSF 130


Top