BLASTX nr result

ID: Coptis21_contig00038743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038743
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG56393.1| Pinus taeda anonymous locus UMN_5889_01 genomic s...   102   4e-20
gb|AFG56391.1| Pinus taeda anonymous locus UMN_5889_01 genomic s...   100   1e-19
gb|ABK24764.1| unknown [Picea sitchensis]                              96   4e-18
gb|ABK24579.1| unknown [Picea sitchensis]                              96   4e-18
ref|XP_002283522.1| PREDICTED: uncharacterized transporter lpg16...    87   1e-15

>gb|AFG56393.1| Pinus taeda anonymous locus UMN_5889_01 genomic sequence
          Length = 133

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/76 (64%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
 Frame = +1

Query: 97  GSKNMDTYLDESKLEAN--QADSKGGTKSRKLKMLPLMFLIYFAVSGGPFGEEPTVKAAG 270
           GS N D   +   +EA   + +S+ G+KS+KLK++PL+FLIYF VSGGPFGEEP VKAAG
Sbjct: 8   GSSNDDEDQEHENIEAGGQRIESRSGSKSKKLKLIPLIFLIYFEVSGGPFGEEPAVKAAG 67

Query: 271 PLLAIIGFLVFPFIWS 318
           PLLAI GFLVFPF+WS
Sbjct: 68  PLLAIAGFLVFPFVWS 83


>gb|AFG56391.1| Pinus taeda anonymous locus UMN_5889_01 genomic sequence
           gi|383149053|gb|AFG56392.1| Pinus taeda anonymous locus
           UMN_5889_01 genomic sequence gi|383149055|gb|AFG56394.1|
           Pinus taeda anonymous locus UMN_5889_01 genomic sequence
           gi|383149056|gb|AFG56395.1| Pinus taeda anonymous locus
           UMN_5889_01 genomic sequence
          Length = 133

 Score =  100 bits (250), Expect = 1e-19
 Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = +1

Query: 97  GSKNMDTYLDESKLEAN--QADSKGGTKSRKLKMLPLMFLIYFAVSGGPFGEEPTVKAAG 270
           GS N D   +   +EA   + +S  G+KS+KLK++PL+FLIYF VSGGPFGEEP VKAAG
Sbjct: 8   GSSNDDEDQEHENIEAGGQRIESHSGSKSKKLKLIPLIFLIYFEVSGGPFGEEPAVKAAG 67

Query: 271 PLLAIIGFLVFPFIWS 318
           PLLAI GFLVFPF+WS
Sbjct: 68  PLLAIAGFLVFPFVWS 83


>gb|ABK24764.1| unknown [Picea sitchensis]
          Length = 487

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
 Frame = +1

Query: 97  GSKNMDTYLDESKLEAN--QADSKGGTKSRKLKMLPLMFLIYFAVSGGPFGEEPTVKAAG 270
           GS N D   +   + A   + +S+ G+KS+KLK++PL+FLIYF VSGGPFGEE  VKAAG
Sbjct: 3   GSSNDDEDQEHENVGAGGQRIESRSGSKSKKLKLIPLIFLIYFEVSGGPFGEETAVKAAG 62

Query: 271 PLLAIIGFLVFPFIWS 318
           PLLAI GFL+FPF+WS
Sbjct: 63  PLLAIAGFLIFPFVWS 78


>gb|ABK24579.1| unknown [Picea sitchensis]
          Length = 487

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
 Frame = +1

Query: 97  GSKNMDTYLDESKLEAN--QADSKGGTKSRKLKMLPLMFLIYFAVSGGPFGEEPTVKAAG 270
           GS N D   +   + A   + +S+ G+KS+KLK++PL+FLIYF VSGGPFGEE  VKAAG
Sbjct: 3   GSSNDDEDQEHENVGAGGQRIESRSGSKSKKLKLIPLIFLIYFEVSGGPFGEETAVKAAG 62

Query: 271 PLLAIIGFLVFPFIWS 318
           PLLAI GFL+FPF+WS
Sbjct: 63  PLLAIAGFLIFPFVWS 78


>ref|XP_002283522.1| PREDICTED: uncharacterized transporter lpg1691-like [Vitis
           vinifera]
          Length = 473

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/48 (79%), Positives = 45/48 (93%)
 Frame = +1

Query: 175 SRKLKMLPLMFLIYFAVSGGPFGEEPTVKAAGPLLAIIGFLVFPFIWS 318
           S+KL ++PL+FLIYF V+GGPFGEEP VKAAGPLLAI+GFL+FPFIWS
Sbjct: 26  SKKLSLIPLIFLIYFEVAGGPFGEEPAVKAAGPLLAILGFLIFPFIWS 73


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