BLASTX nr result

ID: Coptis21_contig00038738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038738
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76591.1| hypothetical protein VITISV_020293 [Vitis vinifera]   131   5e-29
emb|CAN79134.1| hypothetical protein VITISV_000843 [Vitis vinifera]   130   8e-29
emb|CAN72986.1| hypothetical protein VITISV_005624 [Vitis vinifera]   130   1e-28
emb|CAA36616.1| unnamed protein product [Solanum tuberosum]           129   2e-28
gb|AFN88207.1| integrase core domain containing protein [Phaseol...   129   2e-28

>emb|CAN76591.1| hypothetical protein VITISV_020293 [Vitis vinifera]
          Length = 1416

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/108 (61%), Positives = 82/108 (75%), Gaps = 1/108 (0%)
 Frame = +1

Query: 13   GMVCRLKWSLYGLK*SPCAWFDRFGNVMVAFGYVWSQADHTLFLHHTQGGTVA-LIVYVH 189
            G VC+LK SLYGLK SP AWF+RFG V+  +GY  SQADHT+F  H+  G VA LIVYV 
Sbjct: 1091 GKVCKLKKSLYGLKQSPRAWFERFGKVIKHYGYTQSQADHTMFYKHSNEGKVAILIVYVD 1150

Query: 190  DIVITGDDDLGIQNLKDYLSQQFDIKDLGPLRYFLGIEVARSDSGIFI 333
            DIV+TGDD   ++ LK  L+++F+IKDLG L+YFLG+E ARS  GIF+
Sbjct: 1151 DIVLTGDDCNELEKLKGKLAEEFEIKDLGALKYFLGMEFARSKEGIFV 1198


>emb|CAN79134.1| hypothetical protein VITISV_000843 [Vitis vinifera]
          Length = 1253

 Score =  130 bits (328), Expect = 8e-29
 Identities = 65/108 (60%), Positives = 82/108 (75%), Gaps = 1/108 (0%)
 Frame = +1

Query: 13   GMVCRLKWSLYGLK*SPCAWFDRFGNVMVAFGYVWSQADHTLFLHHT-QGGTVALIVYVH 189
            G VC+LK SLYGLK SP AWF+RFG V+  +GY  SQADHT+F  H+ +G  V LIVYV 
Sbjct: 945  GKVCKLKKSLYGLKQSPRAWFERFGKVIKHYGYTQSQADHTMFYKHSNEGKVVILIVYVD 1004

Query: 190  DIVITGDDDLGIQNLKDYLSQQFDIKDLGPLRYFLGIEVARSDSGIFI 333
            DIV+TGDD   ++ LK  L+++F+IKDLG L+YFLG+E ARS  GIF+
Sbjct: 1005 DIVLTGDDCNELEKLKGKLAEEFEIKDLGALKYFLGMEFARSKEGIFV 1052


>emb|CAN72986.1| hypothetical protein VITISV_005624 [Vitis vinifera]
          Length = 761

 Score =  130 bits (326), Expect = 1e-28
 Identities = 64/108 (59%), Positives = 82/108 (75%), Gaps = 1/108 (0%)
 Frame = +1

Query: 13  GMVCRLKWSLYGLK*SPCAWFDRFGNVMVAFGYVWSQADHTLFLHHT-QGGTVALIVYVH 189
           G VC+LK SLYGLK SP AWF+ FG V+  +GY  SQADHT+F  H+ +G  V LIVYV 
Sbjct: 482 GKVCKLKKSLYGLKQSPRAWFEHFGKVIKHYGYTQSQADHTMFYKHSNEGKVVILIVYVD 541

Query: 190 DIVITGDDDLGIQNLKDYLSQQFDIKDLGPLRYFLGIEVARSDSGIFI 333
           DIV+TGDD   ++ LK+ L+++F+IKDLG L+YFLG+E ARS  GIF+
Sbjct: 542 DIVLTGDDCNELEKLKEKLAEEFEIKDLGALKYFLGMEFARSKEGIFV 589


>emb|CAA36616.1| unnamed protein product [Solanum tuberosum]
          Length = 390

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
 Frame = +1

Query: 19  VCRLKWSLYGLK*SPCAWFDRFGNVMVAFGYVWSQADHTLFLHHT-QGGTVALIVYVHDI 195
           +CRL+ SLYGLK SP AWF+RF   +   GYV  QADHT+F  H+ +G T  LIVYV DI
Sbjct: 30  ICRLRRSLYGLKQSPRAWFERFTQFVKRQGYVQGQADHTMFTRHSLEGKTTVLIVYVDDI 89

Query: 196 VITGDDDLGIQNLKDYLSQQFDIKDLGPLRYFLGIEVARSDSGIFI 333
           ++TGDD + I+NLK+ L+ +F+IKDLGPL+YFLG+EVARS  GI +
Sbjct: 90  ILTGDDVVEIKNLKERLASEFEIKDLGPLKYFLGMEVARSKKGIIV 135


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/109 (57%), Positives = 79/109 (72%)
 Frame = +1

Query: 7    SDGMVCRLKWSLYGLK*SPCAWFDRFGNVMVAFGYVWSQADHTLFLHHTQGGTVALIVYV 186
            S G+VCRL+ SLYGLK SP AWF +F NV+  FG   S+ADH++F  H+  G + L+VYV
Sbjct: 1012 SSGLVCRLRKSLYGLKQSPRAWFGKFSNVVQQFGMTRSEADHSVFYRHSSVGCIYLVVYV 1071

Query: 187  HDIVITGDDDLGIQNLKDYLSQQFDIKDLGPLRYFLGIEVARSDSGIFI 333
             DIV+TG D  GI  +K +L Q F  KDLG LRYFLGIEVA+S++GI I
Sbjct: 1072 DDIVLTGSDHHGISQVKQHLCQNFQTKDLGKLRYFLGIEVAQSNTGIVI 1120


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