BLASTX nr result

ID: Coptis21_contig00038737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038737
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82620.1| hypothetical protein VITISV_002311 [Vitis vinifera]   134   6e-30
emb|CBI36793.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002284576.1| PREDICTED: mannosylglycoprotein endo-beta-ma...   132   3e-29
sp|Q5H7P5.4|EBM_LILLO RecName: Full=Mannosylglycoprotein endo-be...   131   5e-29
gb|AFW77888.1| hypothetical protein ZEAMMB73_123246 [Zea mays]        131   7e-29

>emb|CAN82620.1| hypothetical protein VITISV_002311 [Vitis vinifera]
          Length = 973

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/100 (67%), Positives = 76/100 (76%)
 Frame = +1

Query: 100 GKTKLDSGWLAARSTEIELTGIQLXXXXXXXXXXGISSPWIPAVVPGTVLGTLLKNKLIP 279
           GKTKLDSGWLAARST+I+LTG QL          G SSPW+ AVVPGTVL TL+KNKL+P
Sbjct: 5   GKTKLDSGWLAARSTDIQLTGTQLTTTHPPA---GPSSPWMEAVVPGTVLATLVKNKLVP 61

Query: 280 DPFYGLENEAIIDIADSGRDYYXXXXXXXXDCALSGNQHV 399
           DPFYGLENE+I+DIAD+GR+YY         C LSGNQHV
Sbjct: 62  DPFYGLENESILDIADAGREYYTFWFFRTFHCKLSGNQHV 101


>emb|CBI36793.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/100 (65%), Positives = 76/100 (76%)
 Frame = +1

Query: 100 GKTKLDSGWLAARSTEIELTGIQLXXXXXXXXXXGISSPWIPAVVPGTVLGTLLKNKLIP 279
           GKTKLDSGW+AARST+I+LTG QL          G +SPW+ AVVPGTVL TL+KNKL+P
Sbjct: 5   GKTKLDSGWVAARSTDIQLTGTQLTTTHPPA---GPTSPWMEAVVPGTVLATLVKNKLVP 61

Query: 280 DPFYGLENEAIIDIADSGRDYYXXXXXXXXDCALSGNQHV 399
           DPFYGLENE+I+DIAD+GR+YY         C LSGNQHV
Sbjct: 62  DPFYGLENESILDIADAGREYYTFWFFRTFHCKLSGNQHV 101


>ref|XP_002284576.1| PREDICTED: mannosylglycoprotein endo-beta-mannosidase-like [Vitis
           vinifera]
          Length = 973

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/100 (65%), Positives = 76/100 (76%)
 Frame = +1

Query: 100 GKTKLDSGWLAARSTEIELTGIQLXXXXXXXXXXGISSPWIPAVVPGTVLGTLLKNKLIP 279
           GKTKLDSGW+AARST+I+LTG QL          G +SPW+ AVVPGTVL TL+KNKL+P
Sbjct: 5   GKTKLDSGWVAARSTDIQLTGTQLTTTHPPA---GPTSPWMEAVVPGTVLATLVKNKLVP 61

Query: 280 DPFYGLENEAIIDIADSGRDYYXXXXXXXXDCALSGNQHV 399
           DPFYGLENE+I+DIAD+GR+YY         C LSGNQHV
Sbjct: 62  DPFYGLENESILDIADAGREYYTFWFFRTFHCKLSGNQHV 101


>sp|Q5H7P5.4|EBM_LILLO RecName: Full=Mannosylglycoprotein endo-beta-mannosidase;
           Short=Endo-beta-mannosidase; Contains: RecName:
           Full=Mannosylglycoprotein endo-beta-mannosidase 31 kDa
           subunit; Contains: RecName: Full=Mannosylglycoprotein
           endo-beta-mannosidase 28 kDa subunit; Contains: RecName:
           Full=Mannosylglycoprotein endo-beta-mannosidase 42 kDa
           subunit gi|118766235|dbj|BAD89079.2|
           endo-beta-mannosidase [Lilium longiflorum]
          Length = 953

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/100 (66%), Positives = 73/100 (73%)
 Frame = +1

Query: 100 GKTKLDSGWLAARSTEIELTGIQLXXXXXXXXXXGISSPWIPAVVPGTVLGTLLKNKLIP 279
           GK  LDSGWLAARSTE+ELTG+QL          G S+PWI AVVPGTVLGTLLKNKL+P
Sbjct: 2   GKQVLDSGWLAARSTELELTGVQLTTTRPPS---GTSAPWIEAVVPGTVLGTLLKNKLVP 58

Query: 280 DPFYGLENEAIIDIADSGRDYYXXXXXXXXDCALSGNQHV 399
           DPFYGL NE I+DI DSGR+YY        +C LS NQHV
Sbjct: 59  DPFYGLNNEGILDIYDSGREYYTFWFFKSFECKLSENQHV 98


>gb|AFW77888.1| hypothetical protein ZEAMMB73_123246 [Zea mays]
          Length = 978

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/99 (63%), Positives = 72/99 (72%)
 Frame = +1

Query: 100 GKTKLDSGWLAARSTEIELTGIQLXXXXXXXXXXGISSPWIPAVVPGTVLGTLLKNKLIP 279
           GK  LD+GWLAARSTE+ LTG+QL            ++PW+ A VPGTVLGTLLKNKLIP
Sbjct: 6   GKRVLDTGWLAARSTEVALTGVQLTTTHPPAADPAPAAPWMSAAVPGTVLGTLLKNKLIP 65

Query: 280 DPFYGLENEAIIDIADSGRDYYXXXXXXXXDCALSGNQH 396
           DPFYGL N+AIIDIAD+GR+YY         CALSGNQH
Sbjct: 66  DPFYGLNNQAIIDIADAGREYYTFWFFTTFQCALSGNQH 104


Top