BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038723
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530005.1| pentatricopeptide repeat-containing protein,...   124   6e-27
ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
emb|CBI22251.3| unnamed protein product [Vitis vinifera]              117   7e-25
ref|XP_002323875.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002333684.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530484|gb|EEF32367.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 499

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/91 (63%), Positives = 73/91 (80%)
 Frame = +3

Query: 3   ETCTSMKHLKRIHAVAIRTNLHCHTVLLAKILRFASVSPWGDLHFAHRLFDQMPQPNTFF 182
           E C SM HLK+IHA ++ T+LH H+V+L K+LRFA+VSP GDL +A RLFDQMPQPNTFF
Sbjct: 24  ENCQSMNHLKQIHAHSLLTDLHNHSVILGKMLRFAAVSPSGDLPYAQRLFDQMPQPNTFF 83

Query: 183 YNTLIRGYSKCPSPSTSIHLFKKMRLHRVPP 275
           YNT+IRGY+K  SPS  ++LF +MR + V P
Sbjct: 84  YNTIIRGYAKSSSPSYCVNLFNQMRQNHVDP 114


>ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 663

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/91 (63%), Positives = 69/91 (75%)
 Frame = +3

Query: 3   ETCTSMKHLKRIHAVAIRTNLHCHTVLLAKILRFASVSPWGDLHFAHRLFDQMPQPNTFF 182
           E C +M+ LK IHA+A R NLH H ++LAKI RFA+VSP G LH+A RLF Q+ QPNTFF
Sbjct: 190 EACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFF 249

Query: 183 YNTLIRGYSKCPSPSTSIHLFKKMRLHRVPP 275
           YNTLIRGYSK  SPS S+ LF +MR + V P
Sbjct: 250 YNTLIRGYSKSSSPSQSVQLFNQMRRNCVDP 280


>emb|CBI22251.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/91 (63%), Positives = 69/91 (75%)
 Frame = +3

Query: 3   ETCTSMKHLKRIHAVAIRTNLHCHTVLLAKILRFASVSPWGDLHFAHRLFDQMPQPNTFF 182
           E C +M+ LK IHA+A R NLH H ++LAKI RFA+VSP G LH+A RLF Q+ QPNTFF
Sbjct: 3   EACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFF 62

Query: 183 YNTLIRGYSKCPSPSTSIHLFKKMRLHRVPP 275
           YNTLIRGYSK  SPS S+ LF +MR + V P
Sbjct: 63  YNTLIRGYSKSSSPSQSVQLFNQMRRNCVDP 93


>ref|XP_002323875.1| predicted protein [Populus trichocarpa] gi|222866877|gb|EEF04008.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = +3

Query: 3   ETCTSMKHLKRIHAVAIRTNLHCHTVLLAKILRFASVSPWGDLHFAHRLFDQMPQPNTFF 182
           E C SM  LK+IHA ++   LH H+++LAK+LRFA+VSP GDL +A RLFDQ+P PNTFF
Sbjct: 3   EACNSMSRLKQIHAHSLLAGLHDHSIILAKMLRFAAVSPSGDLAYAQRLFDQLPHPNTFF 62

Query: 183 YNTLIRGYSKCPSPSTSIHLFKKMRLHRVPP 275
           YNTLIRGY+K   PS S+HL  +MR + V P
Sbjct: 63  YNTLIRGYAKSSIPSYSLHLVNQMRQNGVDP 93


>ref|XP_002333684.1| predicted protein [Populus trichocarpa] gi|222838021|gb|EEE76386.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = +3

Query: 3   ETCTSMKHLKRIHAVAIRTNLHCHTVLLAKILRFASVSPWGDLHFAHRLFDQMPQPNTFF 182
           E C SM  LK+IHA ++   LH H+++LAK+LRFA+VSP GDL +A RLFDQ+P PNTFF
Sbjct: 24  EACNSMSRLKQIHAHSLLAGLHDHSIILAKMLRFAAVSPSGDLAYAQRLFDQLPHPNTFF 83

Query: 183 YNTLIRGYSKCPSPSTSIHLFKKMRLHRVPP 275
           YNTLIRGY+K   PS S+HL  +MR + V P
Sbjct: 84  YNTLIRGYAKSSIPSYSLHLVNQMRQNGVDP 114