BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038705
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncat...    86   2e-15
ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus ...    86   2e-15
gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla]    83   3e-14
ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncat...    83   3e-14
emb|CAD29834.2| putative ribosomal protein L2 [Vitis vinifera]         72   4e-11

>ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355506651|gb|AES87793.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 399

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
 Frame = -3

Query: 240 ISSYTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIENL--EGWTIS*SSGC 67
           IS    RKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIE    +G  ++ + G 
Sbjct: 164 ISFDGQRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAPGA 223

Query: 66  YSESDCKRGEIGHMKM 19
            ++   K G+   +K+
Sbjct: 224 VAKLIAKEGKSATLKL 239


>ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus communis]
           gi|223546055|gb|EEF47558.1| 50S ribosomal protein L2,
           putative [Ricinus communis]
          Length = 111

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
 Frame = -3

Query: 240 ISSYTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIENL--EGWTIS*SSGC 67
           ISS T RKPYALEEACTVWE +LIDQKEESTSTDMPLGTAIHNIE    +G  ++ ++  
Sbjct: 5   ISSSTPRKPYALEEACTVWEEILIDQKEESTSTDMPLGTAIHNIEITFGKGGQLARAASA 64

Query: 66  YSESDCKRGEIGHMKM 19
            ++   K G+   +K+
Sbjct: 65  VAKLIAKEGKSATLKL 80


>gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla]
          Length = 122

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = -3

Query: 216 PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIENL--EGWTIS*SSGCYSESDCKR 43
           PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIE    +G  ++ ++G  ++   K 
Sbjct: 1   PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKE 60

Query: 42  GEIGHMKM 19
           G+   +K+
Sbjct: 61  GKSATLKL 68


>ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355507116|gb|AES88258.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 382

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = -3

Query: 216 PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIENL--EGWTIS*SSGCYSESDCKR 43
           PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIE    +G  ++ ++G  ++   K 
Sbjct: 235 PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKE 294

Query: 42  GEIGHMKM 19
           G+   +K+
Sbjct: 295 GKSATLKL 302


>emb|CAD29834.2| putative ribosomal protein L2 [Vitis vinifera]
          Length = 163

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
 Frame = -3

Query: 201 EACTVWEGVLIDQKEESTSTDMPLGTAIHNIENL--EGWTIS*SSGCYSESDCKRGEIGH 28
           EACTVWEGVLIDQKEESTSTDMPLGTAIHNIE    +G  ++ ++G  ++   K G+   
Sbjct: 1   EACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT 60

Query: 27  MKM 19
           +K+
Sbjct: 61  LKL 63