BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038704
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34306.1| Polyprotein, putative [Solanum demissum]               141   6e-32
gb|AAU90333.1| Putative gag and pol polyprotein, identical [Sola...   136   2e-30
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               105   4e-21
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          102   2e-20
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   100   2e-19

>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score =  141 bits (355), Expect = 6e-32
 Identities = 72/124 (58%), Positives = 91/124 (73%), Gaps = 6/124 (4%)
 Frame = +1

Query: 25  VTEMPLVAMISEINLVNGSEGWWIDTGASRHVCYDRSLFKSYTESGD-KKVLLGDSHTTI 201
           VTE P VA+I++IN+V   +GWW D+GA+RHVCYD+  FK YT   + K ++LGDSHTT 
Sbjct: 289 VTEEPFVAVITDINMVENVDGWWADSGANRHVCYDKDWFKKYTHFEEPKTIMLGDSHTTQ 348

Query: 202 VLGTSEVELKFTSGKVVILKDV-----K*ENLVSGYLLNKAGFTQTIGSDQYSITKNGMF 366
           VLGT +VEL FTSG+V+ LKDV       + L+S +LLNKAGF Q I S+QY I K G+F
Sbjct: 349 VLGTGDVELCFTSGRVLTLKDVLYTPSMRKKLMSSFLLNKAGFKQIIESNQYVIVKKGIF 408

Query: 367 VGKG 378
           VGKG
Sbjct: 409 VGKG 412


>gb|AAU90333.1| Putative gag and pol polyprotein, identical [Solanum demissum]
          Length = 853

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/124 (54%), Positives = 89/124 (71%), Gaps = 6/124 (4%)
 Frame = +1

Query: 25  VTEMPLVAMISEINLVNGSEGWWIDTGASRHVCYDRSLFKSYTESGD-KKVLLGDSHTTI 201
           VTE P VA+I++IN+V   +GWW+D+GA+RHVCYD+  FK YT   + K ++LGD+HTT 
Sbjct: 136 VTEEPFVAVITDINMVENVDGWWVDSGANRHVCYDKDWFKKYTHFEEPKTIMLGDAHTTQ 195

Query: 202 VLGTSEVELKFTSGKVVILKDV-----K*ENLVSGYLLNKAGFTQTIGSDQYSITKNGMF 366
           VLG  +VEL F+SG+ + LKDV       +NL+S +L NK GF Q I SDQY I K G+F
Sbjct: 196 VLGKGDVELCFSSGRELTLKDVLYTPSMRKNLMSSFLFNKVGFKQIIESDQYVIVKKGIF 255

Query: 367 VGKG 378
           VGKG
Sbjct: 256 VGKG 259


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  105 bits (262), Expect = 4e-21
 Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 7/123 (5%)
 Frame = +1

Query: 31  EMPLVAMISEINLVNGSEGWWIDTGASRHVCYDRSLFKSYTESGD--KKVLLGDSHTTIV 204
           E  +VA++S++NLV     W +D+GA+RH+C +R++F SYT  GD  ++V LGDS TT V
Sbjct: 303 EDTIVAVVSQVNLVTNVSKWVVDSGATRHICANRNVFTSYTSVGDGEEQVYLGDSRTTPV 362

Query: 205 LGTSEVELKFTSGKVVILKDVK-----*ENLVSGYLLNKAGFTQTIGSDQYSITKNGMFV 369
           LG  +V LK TSGK + L DV        NLVS  LL+K G   +  SD+  ITKN +FV
Sbjct: 363 LGKGKVLLKLTSGKTLALNDVLHVPSIRVNLVSVALLSKVGVKVSFESDKIVITKNNVFV 422

Query: 370 GKG 378
           GKG
Sbjct: 423 GKG 425


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  102 bits (255), Expect = 2e-20
 Identities = 56/125 (44%), Positives = 82/125 (65%), Gaps = 7/125 (5%)
 Frame = +1

Query: 25  VTEMPLVAMISEINLVNGS-EGWWIDTGASRHVCYDRSLFKSYTESGDK-KVLLGDSHTT 198
           V+++ L A++ E+N+V  +   WWIDTGA+RHVC D+ LF S+  + ++ K+ +G+S T+
Sbjct: 303 VSDINLSAVVLEVNMVGSNPREWWIDTGATRHVCSDKGLFTSFEAASNREKLFMGNSATS 362

Query: 199 IVLGTSEVELKFTSGKVVILKDVK*-----ENLVSGYLLNKAGFTQTIGSDQYSITKNGM 363
            + G  +V LK TSGK + L +V       +NLVSG LLNK GF     SD   ++KNGM
Sbjct: 363 EIEGQGKVALKMTSGKELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGM 422

Query: 364 FVGKG 378
           +VGKG
Sbjct: 423 YVGKG 427


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  100 bits (248), Expect = 2e-19
 Identities = 56/126 (44%), Positives = 85/126 (67%), Gaps = 8/126 (6%)
 Frame = +1

Query: 25  VTEMPLVAMISEINLVNGS-EGWWIDTGASRHVCYDRSLFKSYT--ESGDKKVLLGDSHT 195
           V+ + L A++SE+NLV  + + WWIDTGA+RHVC D+ +F ++   E+G+K V +G+S T
Sbjct: 314 VSNIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEK-VFMGNSTT 372

Query: 196 TIVLGTSEVELKFTSGKVVILKDVK*-----ENLVSGYLLNKAGFTQTIGSDQYSITKNG 360
           + + G  +V LK TSGK + L +V       +NLVSG LLN  GF     S+++ ++K+G
Sbjct: 373 SEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFESNKFVLSKSG 432

Query: 361 MFVGKG 378
           M+VGKG
Sbjct: 433 MYVGKG 438