BLASTX nr result

ID: Coptis21_contig00038702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038702
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29886.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002277339.1| PREDICTED: serine/threonine-protein kinase N...    67   2e-09
emb|CAN81991.1| hypothetical protein VITISV_040411 [Vitis vinifera]    67   2e-09
ref|XP_003625183.1| Serine/threonine protein kinase Nek6 [Medica...    65   6e-09
dbj|BAJ91284.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   8e-09

>emb|CBI29886.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/40 (87%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
 Frame = +2

Query: 53  DKLEELANVLRPFGEEVVSSRETAIWLTKSLMDAQK-LGG 169
           DKLEELA VL+PFGEE VSSRETAIWLTKSLM AQK LGG
Sbjct: 573 DKLEELAGVLKPFGEEAVSSRETAIWLTKSLMTAQKFLGG 612


>ref|XP_002277339.1| PREDICTED: serine/threonine-protein kinase Nek6-like [Vitis
           vinifera]
          Length = 662

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/40 (87%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
 Frame = +2

Query: 53  DKLEELANVLRPFGEEVVSSRETAIWLTKSLMDAQK-LGG 169
           DKLEELA VL+PFGEE VSSRETAIWLTKSLM AQK LGG
Sbjct: 622 DKLEELAGVLKPFGEEAVSSRETAIWLTKSLMTAQKFLGG 661


>emb|CAN81991.1| hypothetical protein VITISV_040411 [Vitis vinifera]
          Length = 973

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/40 (87%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
 Frame = +2

Query: 53   DKLEELANVLRPFGEEVVSSRETAIWLTKSLMDAQK-LGG 169
            DKLEELA VL+PFGEE VSSRETAIWLTKSLM AQK LGG
Sbjct: 933  DKLEELAGVLKPFGEEAVSSRETAIWLTKSLMTAQKFLGG 972


>ref|XP_003625183.1| Serine/threonine protein kinase Nek6 [Medicago truncatula]
           gi|355500198|gb|AES81401.1| Serine/threonine protein
           kinase Nek6 [Medicago truncatula]
          Length = 393

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +2

Query: 53  DKLEELANVLRPFGEEVVSSRETAIWLTKSLMDAQKLGGE 172
           DKLEELA VLRPFG+E VSSRETAIWLTKSL+ AQK   E
Sbjct: 353 DKLEELAGVLRPFGKEAVSSRETAIWLTKSLISAQKFNPE 392


>dbj|BAJ91284.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 523

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = +2

Query: 53  DKLEELANVLRPFGEEVVSSRETAIWLTKSLMDAQKLGGEP 175
           ++L+ELA VLRPFGE  VSSRETAIWLTKSLM   KLGG P
Sbjct: 483 ERLDELAGVLRPFGEGAVSSRETAIWLTKSLMTPPKLGGSP 523


Top