BLASTX nr result

ID: Coptis21_contig00038680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038680
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transpor...   135   3e-30
emb|CBI34989.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002517413.1| amino acid permease, putative [Ricinus commu...   132   3e-29
ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29

>ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transporter At5g14940-like
           [Vitis vinifera]
          Length = 533

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/91 (75%), Positives = 80/91 (87%)
 Frame = +3

Query: 6   MAGGGITKGLGKSCILLIVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGV 185
           MAGG  ++GL K CILLIVVAG+ERFAFKGV SNLVTYLT+VVKMSNS+AAKTVNSWCG+
Sbjct: 1   MAGGQRSRGLNKPCILLIVVAGMERFAFKGVVSNLVTYLTDVVKMSNSTAAKTVNSWCGL 60

Query: 186 SFLLPLLGAFLADSFLDRYSTILASSFLYVV 278
           + +L LL A LADS+  RYSTILASSFLY++
Sbjct: 61  TSMLALLVAPLADSYWYRYSTILASSFLYII 91


>emb|CBI34989.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/91 (75%), Positives = 80/91 (87%)
 Frame = +3

Query: 6   MAGGGITKGLGKSCILLIVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGV 185
           MAGG  ++GL K CILLIVVAG+ERFAFKGV SNLVTYLT+VVKMSNS+AAKTVNSWCG+
Sbjct: 1   MAGGQRSRGLNKPCILLIVVAGMERFAFKGVVSNLVTYLTDVVKMSNSTAAKTVNSWCGL 60

Query: 186 SFLLPLLGAFLADSFLDRYSTILASSFLYVV 278
           + +L LL A LADS+  RYSTILASSFLY++
Sbjct: 61  TSMLALLVAPLADSYWYRYSTILASSFLYII 91


>ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|222874578|gb|EEF11709.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  134 bits (337), Expect = 8e-30
 Identities = 70/91 (76%), Positives = 79/91 (86%)
 Frame = +3

Query: 6   MAGGGITKGLGKSCILLIVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGV 185
           MA G   KGL KSC LLIV+AG+ERFAFKGVASNLVTYLT+VVKMSNS+AAKTVN+WCG 
Sbjct: 1   MASGQKPKGLNKSCFLLIVIAGMERFAFKGVASNLVTYLTDVVKMSNSAAAKTVNNWCGF 60

Query: 186 SFLLPLLGAFLADSFLDRYSTILASSFLYVV 278
           + +LPLL A LADS+ DRYSTIL SSF+YVV
Sbjct: 61  TSMLPLLVASLADSW-DRYSTILTSSFIYVV 90


>ref|XP_002517413.1| amino acid permease, putative [Ricinus communis]
           gi|223543424|gb|EEF44955.1| amino acid permease,
           putative [Ricinus communis]
          Length = 536

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/91 (73%), Positives = 78/91 (85%)
 Frame = +3

Query: 6   MAGGGITKGLGKSCILLIVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGV 185
           MAG   TKG  KSC LLIV+AG+ERFAFKGVASNLVTYLT+VVK+SNS+AAKTVN+WCG 
Sbjct: 1   MAGMQRTKGFNKSCFLLIVIAGIERFAFKGVASNLVTYLTDVVKLSNSAAAKTVNNWCGF 60

Query: 186 SFLLPLLGAFLADSFLDRYSTILASSFLYVV 278
           + +LPLL A LADS  D++ TILASS+LYVV
Sbjct: 61  TSMLPLLVASLADSCWDKHPTILASSYLYVV 91


>ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|222847991|gb|EEE85538.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  132 bits (331), Expect = 4e-29
 Identities = 69/91 (75%), Positives = 79/91 (86%)
 Frame = +3

Query: 6   MAGGGITKGLGKSCILLIVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGV 185
           MA G   KGL +SC LLIV+AG+ERFAFKGVASNLVTYLT+VV MSNS+AAKTVN+WCG 
Sbjct: 1   MASGQKPKGLNRSCFLLIVIAGMERFAFKGVASNLVTYLTDVVMMSNSAAAKTVNNWCGF 60

Query: 186 SFLLPLLGAFLADSFLDRYSTILASSFLYVV 278
           + +LPLL A LADS+ DRYSTIL+SSFLYVV
Sbjct: 61  TSMLPLLVASLADSW-DRYSTILSSSFLYVV 90


Top