BLASTX nr result

ID: Coptis21_contig00038672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00038672
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238292.1| uncharacterized protein LOC100306402 [Glycin...    67   2e-09
ref|XP_004137485.1| PREDICTED: reticulon-like protein B9-like [C...    66   3e-09
dbj|BAK07483.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   3e-09
ref|XP_003528960.1| PREDICTED: reticulon-like protein B9-like [G...    65   4e-09
ref|XP_003555919.1| PREDICTED: reticulon-like protein B9-like [G...    65   6e-09

>ref|NP_001238292.1| uncharacterized protein LOC100306402 [Glycine max]
           gi|255628421|gb|ACU14555.1| unknown [Glycine max]
          Length = 212

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/62 (46%), Positives = 40/62 (64%)
 Frame = +3

Query: 69  ILDSINSFSHYIYDIACGPALKIFLLAIVFLWTLSVFGSFFTMMNLLYLGFLCIETLPAL 248
           +   +NSF    YDI+ G  L +F + I  LW LS  G++FT +NLLY+ FLC+ TLP +
Sbjct: 108 LFQKLNSFLRRFYDISTGKDLTLFFVTIACLWILSAIGNYFTTLNLLYIMFLCLVTLPIM 167

Query: 249 YE 254
           YE
Sbjct: 168 YE 169


>ref|XP_004137485.1| PREDICTED: reticulon-like protein B9-like [Cucumis sativus]
           gi|449518549|ref|XP_004166304.1| PREDICTED:
           reticulon-like protein B9-like [Cucumis sativus]
          Length = 219

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = +3

Query: 81  INSFSHYIYDIACGPALKIFLLAIVFLWTLSVFGSFFTMMNLLYLGFLCIETLPALYE 254
           IN F   I+DIA G  L +F LAIV L+ LSV GS+ + +NLLY GF+ +ETLP LYE
Sbjct: 119 INQFFTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYE 176


>dbj|BAK07483.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 261

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/58 (48%), Positives = 41/58 (70%)
 Frame = +3

Query: 81  INSFSHYIYDIACGPALKIFLLAIVFLWTLSVFGSFFTMMNLLYLGFLCIETLPALYE 254
           +N F  ++ D++C   LK F+LAIV LW  SV GS+F ++ ++Y+GF+C  TLP LYE
Sbjct: 164 VNKFLGFLQDVSCERNLKHFVLAIVGLWAASVAGSWFNLLTVIYIGFVCAHTLPVLYE 221


>ref|XP_003528960.1| PREDICTED: reticulon-like protein B9-like [Glycine max]
          Length = 222

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/57 (54%), Positives = 41/57 (71%)
 Frame = +3

Query: 84  NSFSHYIYDIACGPALKIFLLAIVFLWTLSVFGSFFTMMNLLYLGFLCIETLPALYE 254
           N     +  I+CG  L IFLL IV L+ LSV GS+F+ +NLLY+GFLC++TLP +YE
Sbjct: 123 NQLLPMLLHISCGIDLPIFLLNIVSLYILSVIGSYFSFVNLLYIGFLCMQTLPIVYE 179


>ref|XP_003555919.1| PREDICTED: reticulon-like protein B9-like [Glycine max]
          Length = 211

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/62 (45%), Positives = 39/62 (62%)
 Frame = +3

Query: 69  ILDSINSFSHYIYDIACGPALKIFLLAIVFLWTLSVFGSFFTMMNLLYLGFLCIETLPAL 248
           +    NSF    YDI+ G  L +F + I  LW +S  G++FT +NLLY+ FLC+ TLP +
Sbjct: 108 LFQKFNSFLRRFYDISTGKDLTLFFVTIAGLWIMSAIGNYFTTLNLLYIMFLCLVTLPIM 167

Query: 249 YE 254
           YE
Sbjct: 168 YE 169


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